Gene Plim_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2339 
Symbol 
ID9139044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3032146 
End bp3034062 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content55% 
IMG OID 
ProductFMN-binding domain protein 
Protein accessionYP_003630364 
Protein GI296122586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGCG TTCGCCACGA CCTGCTGCCG ATTGTCGACC GGGAAGCTCT TTCAAAACCA 
ATGAGAGGGC CCGGTCGATT CTTTTGGAAT ACAGTCATCC ATACAGGCCG GGTTCTGCTG
CTGGTGCTGC TGATCCTCAT GATTCGCTGG CAGGCTGAGC AGATCAAATC TCGGGCGCAA
GCGAAGGACC TTACCGCACG ATATCTGCCA GTAGTGCAGA AGTTCTGGCC GGAAGCACAG
AGGTTGGTAC CGCGGGGAAA GGCCGAAGAG ATTTCGGACG GTGGATTGCC CGGCAGCAAT
TCCCCGAAGT TCGACCAGCT TGTCGATTTT GTCGTGCTGG GTGCACAATC TGAGCCTGTG
GGATTCGTCA CACAGACCAC ACCGGCCAGT GATCGTTATC TGGGGTTTTC CGGGCCAACC
AACGTATTGG TGGGCTGGGA TGTCGAAGGC AAGGTGGCGT GGGCTGAGAT CGCAGACAGT
CGAGATACTC GTGACCATGT TGAGCTGATT GTCAGGGATG GAAAATTCCT GGCCCAGTGG
AATGGGAAGG GCTTTCAGAC AGTCAGTGAA GACATCGTTG ATCAATCAGC CATGCGGCAT
GTGGCTGGGG CAACTCTAAC ATGTCTGGCC ATCCTCCAGG GGTTGGAAGC TCGACTGAAT
TCACAACAGG TGGTGGCTGC CAGACCGGCG GATTCGACGC GCTTTCCTTT GGCTGTGACA
ATTGAGGATG TGCAGAGGCT CTTTCCAAAA GCTTCACGAT TTGAACCTCA TGCCGAGACA
TCTTTGCTTC TGGATGTCTT TGCTGCCGAT GGCCAAACGT TAGGCCAGAT TTTTCGCACT
GTACCAGCAG CCGATCAATT GATTGGTTAT CAGGGGCCGA CGGAAGTGCT GGTCAGTCTG
CTCCCTGATG GACATCTGGG CCAACTGCTG GTCGGTCGCA GTTTTGATAA CGAGCCCTAT
GTGGGATATG TTCGCGACGA CGCCTGGTTT GCCGAACTCG TTAAGGGCAA GACGGTGAAG
GGACTTGCCG AGACGACTTT TGAAGAGTGG GGTGTCGAAG GAGTCTCTGG TGCCACAATG
ACCAGCCAGA CGATTGCCCG GGGGTTGCTG GCTGCTGCGA TCGAATTATC AAAAGAGATG
GAAGCTCAGC AGAAACAGCC GTCGATTGAC TCGAAAAATC AGGCGACGGG CATCTTTGGC
TTGATCAAAA CCATCAACTG GTCGTCGCCG CGACTCTGGC AACAAACGTT GACGGGACTT
GTTGTCCTTC TGGCTTGTCT GGTGGGGTTA ACCCATCTGC GGGGAAACCT ATGGGTCCGA
CGGGGATTGC AGCTTTTGGT ACTGGGATAT CTGGGAGTGA TGAACGGCGA ACTCCTGTCG
TTAGCCATGT TCAGCGGTTG GGCTCAGAGT GGGATCCCGT GGAATAGTGC GGGAGGATTG
ATTGCCATGT CGATGGCTGC TGTGGCATTG CCACTGGTGG CTCGGACGAA TGTCTATTGC
TCGCATCTCT GTCCACATGG TGTGCTCCAG CAGTGGATGG CGGGTCATCG ACACTGGCGT
CCGAAATTAC CAGCCAGGGT GGTTACGGTA CTGAAACTGG TGATACCGGC TTTACTACTG
GTGGCGTTGT GTGGATCGAT GGGAGTGCTC TCGATCAGTC TGGTTGATCT GGAACCATTT
GATGCTTATT CGTGGAGAGC CGCTGGCTGG ATCACGACAG TATTGGCGAT AGGAAGTCTG
GTGATCTCGT GGTTCATTCC GATGGGATAT TGCCGGTTTG GCTGCCCGAC AGGAAGTTTG
CTTGAGTATT TGCGTCGGAA TGCCCGGAGT GGCCAGATTC AGCCGGGAGA TTTTCTGGCG
ATGGCCTGCC TGATCATTGC GGGTGGCTTG ATGCTATGGG ATGTGGTGGG ACCATGA
 
Protein sequence
MSGVRHDLLP IVDREALSKP MRGPGRFFWN TVIHTGRVLL LVLLILMIRW QAEQIKSRAQ 
AKDLTARYLP VVQKFWPEAQ RLVPRGKAEE ISDGGLPGSN SPKFDQLVDF VVLGAQSEPV
GFVTQTTPAS DRYLGFSGPT NVLVGWDVEG KVAWAEIADS RDTRDHVELI VRDGKFLAQW
NGKGFQTVSE DIVDQSAMRH VAGATLTCLA ILQGLEARLN SQQVVAARPA DSTRFPLAVT
IEDVQRLFPK ASRFEPHAET SLLLDVFAAD GQTLGQIFRT VPAADQLIGY QGPTEVLVSL
LPDGHLGQLL VGRSFDNEPY VGYVRDDAWF AELVKGKTVK GLAETTFEEW GVEGVSGATM
TSQTIARGLL AAAIELSKEM EAQQKQPSID SKNQATGIFG LIKTINWSSP RLWQQTLTGL
VVLLACLVGL THLRGNLWVR RGLQLLVLGY LGVMNGELLS LAMFSGWAQS GIPWNSAGGL
IAMSMAAVAL PLVARTNVYC SHLCPHGVLQ QWMAGHRHWR PKLPARVVTV LKLVIPALLL
VALCGSMGVL SISLVDLEPF DAYSWRAAGW ITTVLAIGSL VISWFIPMGY CRFGCPTGSL
LEYLRRNARS GQIQPGDFLA MACLIIAGGL MLWDVVGP