Gene Plim_2328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2328 
Symbol 
ID9139033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp3019695 
End bp3020375 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content52% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003630353 
Protein GI296122575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.705701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAG TCCAGCAGGT CACCAAGATT CATGTTCGAG GACAAACGCA GGTTTACGCA 
CTTCGCGAAG TGACCTGCCA GATTCCCGCC GGTGCATTCA GTTTTATTCT GGGACCTTCT 
GGCAGCGGAA AGAGCACATT GCTGTACCTT ATCGGTTGCC TGGATGAACC GACGACGGGA 
GAAATCTTCG TCAATGGGCA GTCGCTGAAA AAAATGACTG CCACCGAAAA AGACGCCTAC 
CGACGAAATG ACGTCGGTTT TATCTTTCAA AGCTTCAATC TGCTGGCCAA TCTCAATGCG 
GTGGATAACG TTCTTGTCCC TTACTTAGCC CGCGGTGCCT CGACCCAGCA GCGTCAGGAA 
GCCATCGAAT TGCTGGAAAG AGTTGGTTTG AAGGATCGAC TTGATCATCG CCCCAGTCAA 
CTTTCCGGCG GCGAGCAGCA ACGTGTCGCT ATCGCCCGGG CTTTACTCAA AAAACCAAAA 
CTGATTCTGG CCGACGAACC CACTGGCGAA CTTGATTCGG TGAACAGTCA GCAGATTCTG 
GCATTACTGC GCAATTGCAG CCAGGAGTTG AAAACCACCG TGGTTGTCGT CACGCACGAG 
CAGGAATACG TCCACGAGGA TGATTTCATT GTCCGCATTC GGGATGGAAA ACTGGGGACA 
CCCGCAGGGA CTTTGTCATG A
 
Protein sequence
MIEVQQVTKI HVRGQTQVYA LREVTCQIPA GAFSFILGPS GSGKSTLLYL IGCLDEPTTG 
EIFVNGQSLK KMTATEKDAY RRNDVGFIFQ SFNLLANLNA VDNVLVPYLA RGASTQQRQE 
AIELLERVGL KDRLDHRPSQ LSGGEQQRVA IARALLKKPK LILADEPTGE LDSVNSQQIL 
ALLRNCSQEL KTTVVVVTHE QEYVHEDDFI VRIRDGKLGT PAGTLS