Gene Plim_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2310 
Symbol 
ID9139015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp2986207 
End bp2986920 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content55% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003630335 
Protein GI296122557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTGC TGGAAATCGA GAATCTGTCG GTCTCGTATG GTTCGATACG GGCACTTCGC 
GGAATTTCAC TCAAAGTCGA GCCAGGCGAG ATCGTCACTT TGATTGGCGG GAATGGTGCC 
GGCAAATCCA CCACGCTGCG GACCATCTCC GGGCTATTGT CTCCGCAGGA AGGCCAGATC 
CTGTTTGAAG GAAAGCCCAT CGCCTACAAG TCGCCTCATT CGATTGCGGC CAATCGATTG 
ATTCATGTCC CGGAAGGTCG TGGGATCTTT GCCAACTTGA CAGTCGAAGA AAATCTGCGG 
CTGGGCGCGT ATTGCCGAAA TGATGCAAAT GAGATTCGCC AGGATTACGA ACATGCCCTC 
GAATTGTTCC CGCGCGTCAA AGAGCGCTTG TGGCAACTGG CAGGAACATT ATCTGGTGGC 
GAACAGCAGA TGGTCGCCAT TGCCAGAGCC CTGTTGGCGC GGCCCAAACT GCTGATGCTC 
GATGAACCAT CACTGGGCTT GGCACCGCAG ATTGTGCAAC TGATTTTCCA GGTGATTCGT 
AAAATCAATG CGGGAGGGAC GACGATCCTG CTGGTCGAGC AGAATGCCAA CCTGGCACTG 
CAGGTGGCTC ATCGAGCCTA TGTGCTCGAG GTGGGCAAAA TTGAAATGTC CGGGCCCGCT 
GCAGAGCTGG CGAATAGCGA CGACATTCGC AAAGCCTACC TGGGCGGCCA TTAG
 
Protein sequence
MALLEIENLS VSYGSIRALR GISLKVEPGE IVTLIGGNGA GKSTTLRTIS GLLSPQEGQI 
LFEGKPIAYK SPHSIAANRL IHVPEGRGIF ANLTVEENLR LGAYCRNDAN EIRQDYEHAL 
ELFPRVKERL WQLAGTLSGG EQQMVAIARA LLARPKLLML DEPSLGLAPQ IVQLIFQVIR 
KINAGGTTIL LVEQNANLAL QVAHRAYVLE VGKIEMSGPA AELANSDDIR KAYLGGH