Gene Plim_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2307 
Symbol 
ID9139012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2983260 
End bp2984225 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content53% 
IMG OID 
Productinner-membrane translocator 
Protein accessionYP_003630332 
Protein GI296122554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACT TTCTACAGAC ATTAATGACA GCCCTGGCGA TTGGCAGCTT GTATGCCCTG 
ATCGCACTGG GCTACACCAT GGTTTATGGT GTGCTTAAAT TTATCAATTT TGCACACAGC
GATATTGTGG TACTGGGCGC CTGGCTCAGT TATTCGTTTG CCATCCGGGC TCTCCCTCTG
GTGGGATTGG ATGCACACAA TCCAACGACA CCTCCCCCCA TCTGGATGAC CGCTGGAATT
TTTGTGGCAG TTCTAGCGCT ATGCAGCCTG GCTGGTTTTC TCATTGAGCG ACTGGCCTAT
CGGCCCTTGC GTCGTGCCCC CCGGTTGAAT GTGCTGATCA CAGCCATCGG AGTCTCTCTC
TTGCTGCAGA ACGTCGGGCA GCTCGACTTT GTGTTTGGGG CCAGCCCTCA GAAGATGCCC
GCTTTGCTGC CCAACTGGGA ACTTCCAATC CCATTTGGAC AAGGTGAATC GATTCGATAT
GTGGTCTTGC CGCTGATTGA CTGCATCATC TTTGCCGTCT CTGGCCTTTT GATGCTGGCT
CTGGAACTAC TGATCTTTCG GACAAAATTT GGTACGGCAC TGCGGGCCGT CTCGTTCAAT
ACCGATTTTG CCGCGCTGAT GGGGATTCCT GTGGATCGTG CCATCTCGCT GACTTTCATG
CTGGGTTCGG CTCTCGCTGG AGCCGCTGGA TTTCTCTACG TGCTGAAGTT CCCCAGTATG
AACCAGCCGG CTCATAGTGT CTGGGTACTG CTGGGTCTGA AAGCGTTTGT GGCGGCTGTG
GTCGGCGGGA TTGGAAATGT TCGCGGAGCA GTCCTGGGTG GTTTTATCAT TGCCTTCGTC
GAACAGTTCG GGGCGTATTA CATCTCGTCA AACTATCGCG ATGTCTATGT CTTCTCTTTG
TTGATCTTGA TTCTGCTCAT CAAGCCCACG GGGCTCCTGG GATCACCCGT GCGGGAAAAA
GTCTAA
 
Protein sequence
MADFLQTLMT ALAIGSLYAL IALGYTMVYG VLKFINFAHS DIVVLGAWLS YSFAIRALPL 
VGLDAHNPTT PPPIWMTAGI FVAVLALCSL AGFLIERLAY RPLRRAPRLN VLITAIGVSL
LLQNVGQLDF VFGASPQKMP ALLPNWELPI PFGQGESIRY VVLPLIDCII FAVSGLLMLA
LELLIFRTKF GTALRAVSFN TDFAALMGIP VDRAISLTFM LGSALAGAAG FLYVLKFPSM
NQPAHSVWVL LGLKAFVAAV VGGIGNVRGA VLGGFIIAFV EQFGAYYISS NYRDVYVFSL
LILILLIKPT GLLGSPVREK V