Gene Plim_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2288 
Symbol 
ID9138993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2953445 
End bp2954320 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content54% 
IMG OID 
ProductUroporphyrinogen III synthase HEM4 
Protein accessionYP_003630313 
Protein GI296122535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.130767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGGAA AGGCGAACGT GCAGAGCTCA TCTCATCCAG TCAGTAATGA TAAGACTGAC 
CGCCTGAAAA TCTGCTCTTT CGAGAGCCGC CGTGGCGAGG AGATGGCTTC GCTGATCGAG
CGTATGGGCG GGCTCGCCAC GATTGCACCG TCGATGCGTG AGATTTCTCT CGGAGAGAAC
CCTGAGGCGT TCCGATTTGG GGAACGATTA CTCAATCACG AATTCCGCCT GATGGTTTTC
CTCACCGGTG TGGGGGCGAG AGCTTTACTT GAAGTATTGG AAACTCGATT TCCCAGAGAC
GAGATCCTGG CTGCCTGGGA TCGCTGCGTG ACGATTGTTC GTGGGCCCAA ACCCCATGCC
GTGCTGAGGG AGTGGGGTGT GCATGTTGAT GCGCGTGCCC CCGAACCAAA CACCTGGCGA
GAACTGCTTT CCACTCTCGA CGATTGGGGT GCACTTCAAT CCGTTTCGAT GGCTGTGCAG
GAATATGGTC AGCCCAATGA GTTATTGTAC GAGGAACTTC AGCAGCGTGG TGCCATTGTG
ACGAGGGTTC CCGTCTATCG ATGGGCTTTG CCAGAAGATT TAAATCCCCT TGAAAATGCG
ATTCGTACCT GTGTGCGAGG TGAGTTTGAT GCTCTCTTGT GGACGAGTGC TCAGCAGGTG
CATCATGTGC TGGAAGTCGC CGATCGCATG GGGTTGAAAA TACAGTTTCT TCAGGCAGCC
AACCGGTGTG TGATTGGTTC GATTGGCCCC ACTGCGACAG AAACGCTTAT CGAGCAGGGG
CTTGCTCCTG ACTTAGAACC CGAGCATCCT AAAATGGGCC CACTGGTCAA GCTGGTTTGT
GAGGCCGGTT TGCCGATTGT TGCCCGAAAA CAGTGA
 
Protein sequence
MLGKANVQSS SHPVSNDKTD RLKICSFESR RGEEMASLIE RMGGLATIAP SMREISLGEN 
PEAFRFGERL LNHEFRLMVF LTGVGARALL EVLETRFPRD EILAAWDRCV TIVRGPKPHA
VLREWGVHVD ARAPEPNTWR ELLSTLDDWG ALQSVSMAVQ EYGQPNELLY EELQQRGAIV
TRVPVYRWAL PEDLNPLENA IRTCVRGEFD ALLWTSAQQV HHVLEVADRM GLKIQFLQAA
NRCVIGSIGP TATETLIEQG LAPDLEPEHP KMGPLVKLVC EAGLPIVARK Q