Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2288 |
Symbol | |
ID | 9138993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2953445 |
End bp | 2954320 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Uroporphyrinogen III synthase HEM4 |
Protein accession | YP_003630313 |
Protein GI | 296122535 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.130767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGGAA AGGCGAACGT GCAGAGCTCA TCTCATCCAG TCAGTAATGA TAAGACTGAC CGCCTGAAAA TCTGCTCTTT CGAGAGCCGC CGTGGCGAGG AGATGGCTTC GCTGATCGAG CGTATGGGCG GGCTCGCCAC GATTGCACCG TCGATGCGTG AGATTTCTCT CGGAGAGAAC CCTGAGGCGT TCCGATTTGG GGAACGATTA CTCAATCACG AATTCCGCCT GATGGTTTTC CTCACCGGTG TGGGGGCGAG AGCTTTACTT GAAGTATTGG AAACTCGATT TCCCAGAGAC GAGATCCTGG CTGCCTGGGA TCGCTGCGTG ACGATTGTTC GTGGGCCCAA ACCCCATGCC GTGCTGAGGG AGTGGGGTGT GCATGTTGAT GCGCGTGCCC CCGAACCAAA CACCTGGCGA GAACTGCTTT CCACTCTCGA CGATTGGGGT GCACTTCAAT CCGTTTCGAT GGCTGTGCAG GAATATGGTC AGCCCAATGA GTTATTGTAC GAGGAACTTC AGCAGCGTGG TGCCATTGTG ACGAGGGTTC CCGTCTATCG ATGGGCTTTG CCAGAAGATT TAAATCCCCT TGAAAATGCG ATTCGTACCT GTGTGCGAGG TGAGTTTGAT GCTCTCTTGT GGACGAGTGC TCAGCAGGTG CATCATGTGC TGGAAGTCGC CGATCGCATG GGGTTGAAAA TACAGTTTCT TCAGGCAGCC AACCGGTGTG TGATTGGTTC GATTGGCCCC ACTGCGACAG AAACGCTTAT CGAGCAGGGG CTTGCTCCTG ACTTAGAACC CGAGCATCCT AAAATGGGCC CACTGGTCAA GCTGGTTTGT GAGGCCGGTT TGCCGATTGT TGCCCGAAAA CAGTGA
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Protein sequence | MLGKANVQSS SHPVSNDKTD RLKICSFESR RGEEMASLIE RMGGLATIAP SMREISLGEN PEAFRFGERL LNHEFRLMVF LTGVGARALL EVLETRFPRD EILAAWDRCV TIVRGPKPHA VLREWGVHVD ARAPEPNTWR ELLSTLDDWG ALQSVSMAVQ EYGQPNELLY EELQQRGAIV TRVPVYRWAL PEDLNPLENA IRTCVRGEFD ALLWTSAQQV HHVLEVADRM GLKIQFLQAA NRCVIGSIGP TATETLIEQG LAPDLEPEHP KMGPLVKLVC EAGLPIVARK Q
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