| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2287 |
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| Symbol | |
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| ID | 9138992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2952248 |
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| End bp | 2953291 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_003630312 |
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| Protein GI | 296122534 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.368648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACAA CGGAATTGGC TGACAGTCGC TTTATGCGAG CCGTTCGCCG TGAAGCGACT
GATACCACTC CCATCTGGAT CATGCGTCAG GCTGGGCGAT ATCTGCCCGA ATACATGGCT
GTTCGCAGCA AAGTGACCTT TTTAGAACTT TGCGAAACCC CCGCCTTGGC AGCCGAAGTG
ACGCTCACTG CGCGGGAAGT GCTCGATGTC GATGCCGCGA TTCTCTTTGC CGATCTACTG
CCCATGCTTC GCCCCATGGG CATTGATCTG GAATACGCCA AAGGGGAAGG GCCTGTGATT
CATAATCCCT TGCGGGCTCC TGAAGATTTG CAGCGATTTC GCGAACTCGA AGATTTGAGT
TCTCTTGGAT TTGTTTACGA TGCGATTCGC CTCATTCGCA AAGACCTTCC CGGAAACATC
CCCTTGCTGG GTTTTGCCGG GGCGCCATTC ACATTGGCTT CTTATGTTCT GGAAGGGGGG
GGATCTCGCA ATTATCTGCA TACCAAACGA TGGATGTACA ACCATCCGGA AGAATGGCAC
GAACTGATGG GGAGACTCTC GCGGACGATT GTCAGATATC TGCTGGCCCA GGCGGCTGCC
GGATGTCAGG CCGTGCAGAT CTTCGATAGC TGGGCGGGCT GCTTATCTCC TTCGGATTAT
CGAGAATTTG TTTTGCCCCA CACAAAAGCT GTCATTCGGG AATTGATGCC GCATGTGGCA
GTCATCAACT TCATGACGGG AAATCCGGCA CTACTGGCCA TGCAGAATGA AGCGGGAGGA
AGCCTCCTCG GCATCGATTG GCGGCACGAT ATTGGTGATG TCTGGAAGCT CGTCGGTGAT
TCCAAGGGGA TTCAGGGCAA TCTCGATCCA CTGGTCCTCG AAGCTGATCT TCCTATCTTG
AAGGCGAAGG CCGATGCCAT TCTCGAGGCC AGTCGAGGTC ATCGTGGACA CGTCTTTAAT
CTCGGGCATG GTGTCTATCC GGAAGTCGAT CCTGAGAAAG TGAAAGAGTT GGTACGCCAT
GTTCATGAGT CAGGTGCTCG TTGA
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| Protein sequence | MMTTELADSR FMRAVRREAT DTTPIWIMRQ AGRYLPEYMA VRSKVTFLEL CETPALAAEV
TLTAREVLDV DAAILFADLL PMLRPMGIDL EYAKGEGPVI HNPLRAPEDL QRFRELEDLS
SLGFVYDAIR LIRKDLPGNI PLLGFAGAPF TLASYVLEGG GSRNYLHTKR WMYNHPEEWH
ELMGRLSRTI VRYLLAQAAA GCQAVQIFDS WAGCLSPSDY REFVLPHTKA VIRELMPHVA
VINFMTGNPA LLAMQNEAGG SLLGIDWRHD IGDVWKLVGD SKGIQGNLDP LVLEADLPIL
KAKADAILEA SRGHRGHVFN LGHGVYPEVD PEKVKELVRH VHESGAR
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