Gene Plim_2259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2259 
Symbol 
ID9138964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2912653 
End bp2914242 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content54% 
IMG OID 
Productphosphoenolpyruvate carboxykinase (ATP) 
Protein accessionYP_003630284 
Protein GI296122506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.840661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCGA TGACCATTGA GAACATGGAT CTTTCACACC ATGGGATTAC TGTCAAAACG 
GTGATCCGAA ATGCCAGTCC GTCTCGCTTG TACGAAGAGG CAATACGCTT TGACCCGGGA
ACATCCATCA GCAGCACTGG CGCGCTGATG GCTTACTCCG GAGATAAAAC CGGTCGGTCT
CCGCAAGACA AGCGAATCGT CAAGCACCCG CAATCGGAAG CGGATGTCTG GTGGGGCCCG
GTCAATTTTG CTCTGGAAGA GCGGGCCTAT CTGATCAATC GAGAGCGAGC CATCGATTAT
CTGAACACCC AGTCGAGGCT TTATGTTGTC GATGCCTATG CGGGCTGGGA TCCCCGGCAA
CGACTGAAAA TTCGCGTCAT CTGTTCGCGG CCGTACCATG CCTTGTTCAT GCACACCATG
CTCATTCGGC CGACTGACGA AGAGCTTGAG ACCTTTGGTA CTCCCGATTT CGTGATCTAC
AACTCCGGGC GATTCCCTGC CAATCGCTTC ACCACCGGCA TGACGAGTCG GACAAGCGTT
GACCTGAGCC TCGAACGTGG CGAAATCGTC ATTCTCGGTA CGGAATACGC CGGTGAAATG
AAAAAAGGCG TTTTCACAGT CATGAACTAT CTGCTCCCCA GGCGGGGTGT GCTTTCCATG
CATTGCTCAG CCACTGAAGA CAAAAAGACG GGGAGTTCCT CTGTCCTCTT TGGTCTCTCT
GGCACGGGAA AAACAACACT CTCAGCAGAC CCCAAGCGTC TGCTGATTGG CGATGATGAA
CATGGCTGGG GCGACAAGGG AATTTTCAAT ATCGAGGGTG GGTGCTACGC GAAAGCCATT
TACCTTTCAA AAGAGAGTGA ACCCGAAATC TTTCAGGCCT TGCGCTTTGG GGCTGTGCTC
GAAAACGTCG TTTACGACGA TGCGCACCGG CATGTCGACT TCGACAATGC CAGCATCACT
CAGAACACCC GCGGTGCTTA CCCTCTCGAA TACATTGAAG GGGCCAAGAT CCCCGCGATG
AGTGGGCATC CCGAGCACGT CATCTTCCTG ACCTGTGATG CCTTCGGTGT GATGCCTCCT
GTCAGCAAGC TGACCACAGA AGAGGCGATG TACCATTTTG TCAGTGGCTA CACGGCCAAG
GTGGCTGGTA CGGAAATGGG CGTCAAAGAA CCCCAGGCGA CATTCTCGCC CTGCTTTGGC
GGGCCTTTCC TCGTCTGGAA GCCTGCTCGT TATGCCGAAC TTCTGGCTGA TAAGATCCGC
AAGCATTCCG TGAAGGTCTG GCTCGTCAAC ACAGGCTGGG CCGGTGGAGG CTATGGCGTC
GGCAAAAGAA TCAAGCTGGC CTACACTCGA AAAATCATTG ATTCGATTCA TGATGGCAGC
TTGAACAATG CCCCCACTGC TGCAGATCCG TTCTTTGGGA TCCAGGCTGT CACGCAGATT
GAAGGACTGC CTGACGAACT GCTGACACCC CGGCGGATCT GGAACGATGA GGTGGCCTAC
GAAACCGCCG CCAGGAAGCT TAAGCAACTG TTCGATGAAA ACTACCAGGC GATTTCCGAG
GGGAGAGTCT CCTCATCGAT GGAAGGTTGA
 
Protein sequence
MSSMTIENMD LSHHGITVKT VIRNASPSRL YEEAIRFDPG TSISSTGALM AYSGDKTGRS 
PQDKRIVKHP QSEADVWWGP VNFALEERAY LINRERAIDY LNTQSRLYVV DAYAGWDPRQ
RLKIRVICSR PYHALFMHTM LIRPTDEELE TFGTPDFVIY NSGRFPANRF TTGMTSRTSV
DLSLERGEIV ILGTEYAGEM KKGVFTVMNY LLPRRGVLSM HCSATEDKKT GSSSVLFGLS
GTGKTTLSAD PKRLLIGDDE HGWGDKGIFN IEGGCYAKAI YLSKESEPEI FQALRFGAVL
ENVVYDDAHR HVDFDNASIT QNTRGAYPLE YIEGAKIPAM SGHPEHVIFL TCDAFGVMPP
VSKLTTEEAM YHFVSGYTAK VAGTEMGVKE PQATFSPCFG GPFLVWKPAR YAELLADKIR
KHSVKVWLVN TGWAGGGYGV GKRIKLAYTR KIIDSIHDGS LNNAPTAADP FFGIQAVTQI
EGLPDELLTP RRIWNDEVAY ETAARKLKQL FDENYQAISE GRVSSSMEG