Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2233 |
Symbol | |
ID | 9138938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2879139 |
End bp | 2881445 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | metal dependent phosphohydrolase |
Protein accession | YP_003630258 |
Protein GI | 296122480 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.531626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCACTGT TTTCGCCTCG CAAGACACGC ATTGGTCGAG CTGCCAACCT GGGCAGTTCC AGTTCATTAC TGAATCGTTT TTCGCAACAG ATGGGCCAGG CAGACATCCT GCTTCGTCTG CTTCTGGTCA TGATTTCGCT CGTGCTGATG GTGGTCTGTG TCGAGGGCTG GACGGCCCCC TTCCCTTACC GGCAGGGGCA GTACAGCCGG GATGGAATTG TCGCCCGCAT TGATTTCGGT CGTCTCAATG ACGAAAAAAC CGAAATGGCC AGGCAAAGGA ACGAAGCGGA AACTCCACCG GTCTACCTGG CCCATACCGC CGCCTGGCGC ACTCTGATCG ATGAATTAAG GGAATCACTC TTCGCGATTC TCAATGCCAA ACAGCCGGCA GATGTGCCTG CCGATGTGCT CATATCTTTT GGTTTATCCA TCGATATGAA TGGCAATATG GGGGATAATT TCAAGGCTTG GGAGACTCTC AAATCAACAC TCGGCTCCGA GGAAACAGGT GAGCAGCGAA TTGAGCAGAT GATTGGTGAG TTCACCAAGT TTATTGAGCC TTTGCGTCAG ACAGGGATTC TGGATCCATC CGAATTGGCA CTTCACGATC TCCGAGAAGA TGCCGTCATT CATATCATTC CTGATGAAAA TCCAGCCGAT GAGCAGGATA TTGCCATCAC TCAGGTTCTG TTGAAAGAAG TGCTCAAAAG CACCGGCAAA CTGGGACGCA GCTGGAAATC TTTTGATCTG CTGCAACCTC TGCAACCCTT ATTGGAACGC TGGCTGGTCA ATCGAGCTCC CAGCACTCTG GAGTTTGATG AAGCACGCTC GCGACAGGCC CTCAATGAAG CCCGGCTGCA GACCGAAATC ATTGTCGATA AATATAAACG GGGAACACTG CTGGTTGCCC CGGGAACAAA CATCAGTCCC GAAACATTGA ATATTCTGAA GGCTCAGTTC GATGAGATCG CGGCTGGGAT CGCCTGGTAC GAAGGCCTGT TAAGGGCTGT CGTCGTCTTT CTGCTGCTCT CTGTTCTCGC TGCCGTTAAT GGTTATTACA TTGTTCGTTC CGAACCAAGA CTGGTCAAAA GCACTGCCCG CTTGACCGTT TACTTGAGCA GCTTGCTCCT GGCAATCGCC CTTGCCCGCT GGATGTCTTT CGATCCGTGG CGAGCGGAAC TGATTCCCCT GCTCTGCGTT GTCATGGTGC TGACAATTGC TTATCAGCAG GTCATCGCGG CTCTAACAGG GCTCAGCCTG GCCTTGATCC TGGTGCTTTC GAATGGTTTC GATACAGGAG AGTTTGTCGC GATTCTTGGT GCCATCTGCG TGGCCATTGT CAGTATTGGT CAGGTCTCTT CCCGATCCAA ACTCATCAAA GTTGGGATTG CCACTGCCGG AACTTACTTT TTGCTGACGA TGACGATGGG TGTCATTGTC AGTCAGCGAC CCGACAGGTT GTGGGTCGAC CACGAACTCT TCTGGCACGC ATTGCGAGGT GCGGGATGGT GCATTGCCGC AGGTTATCTT GTGGCTGGCA GCCTGCCATT TATTGAATCG ACCTTCGGCG TGGTGACAGA CATCAGTCTG CTGGAATTGA GCGATGTCTC GCACCCTTTA CTTCAGGAGC TCGTTCGCCG GGCACCGGGC ACATACAACC ACTCAATTGG TGTGGCGACA CTCGCCGAAA CAGCCGCCGA TGCAATTGGC GCCAATGGTC TATTATGTCG GGTGGGAGCT TACTTTCATG ATATCGGGAA GATGCTCAAG CCCCAGTATT TTGTGGAAAA CATGACAGCG GGTGAGTTGA ATCGGCATGA AAATCTCGCC CCCGCCATGA GTACTTTGAT TATCATCGGT CACGTCAAAG ATGGAGCCGA CCTGGGACGC CAGCACCATT TGCCAGACTC GCTGATTGAT TTTATTGAAC AGCATCATGG TACGACACTT GTGGAGTATT TCTTTCACAA GGCTTCCCGA TATGCAGGGC AACAGTCTGC CGAGGTGAGA ACCGAGGTTG AAGAATCATC CTTCCGATAT CCTGGGCCAA AGCCTCAATC GAAAGAAACT GGAATTATGA TGCTGGCGGA CGCTGTCGAA GGCGCCAGCC GAACTCTCAG CGAACCGACT CCCAAACGCA TTGAAACGCT GGTGCACGAA ATCCTGCTCA AGCGGCTGCT CGACGGCCAG TTCGATGAAA GCGGCCTGAC GTTGACCGAG CTGGCGATTG TGGAAGACTC TCTGGTGAAA TCGCTCATTT CGATTTACCA CGGCCGCATC AAATACCCTG ACCAGAAAAC GGCCTAG
|
Protein sequence | MPLFSPRKTR IGRAANLGSS SSLLNRFSQQ MGQADILLRL LLVMISLVLM VVCVEGWTAP FPYRQGQYSR DGIVARIDFG RLNDEKTEMA RQRNEAETPP VYLAHTAAWR TLIDELRESL FAILNAKQPA DVPADVLISF GLSIDMNGNM GDNFKAWETL KSTLGSEETG EQRIEQMIGE FTKFIEPLRQ TGILDPSELA LHDLREDAVI HIIPDENPAD EQDIAITQVL LKEVLKSTGK LGRSWKSFDL LQPLQPLLER WLVNRAPSTL EFDEARSRQA LNEARLQTEI IVDKYKRGTL LVAPGTNISP ETLNILKAQF DEIAAGIAWY EGLLRAVVVF LLLSVLAAVN GYYIVRSEPR LVKSTARLTV YLSSLLLAIA LARWMSFDPW RAELIPLLCV VMVLTIAYQQ VIAALTGLSL ALILVLSNGF DTGEFVAILG AICVAIVSIG QVSSRSKLIK VGIATAGTYF LLTMTMGVIV SQRPDRLWVD HELFWHALRG AGWCIAAGYL VAGSLPFIES TFGVVTDISL LELSDVSHPL LQELVRRAPG TYNHSIGVAT LAETAADAIG ANGLLCRVGA YFHDIGKMLK PQYFVENMTA GELNRHENLA PAMSTLIIIG HVKDGADLGR QHHLPDSLID FIEQHHGTTL VEYFFHKASR YAGQQSAEVR TEVEESSFRY PGPKPQSKET GIMMLADAVE GASRTLSEPT PKRIETLVHE ILLKRLLDGQ FDESGLTLTE LAIVEDSLVK SLISIYHGRI KYPDQKTA
|
| |