| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2230 |
|---|
| Symbol | |
|---|
| ID | 9138935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2873420 |
|---|
| End bp | 2874583 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003630255 |
|---|
| Protein GI | 296122477 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.296163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACGG CCCCAGCACA TCAACGAACG CGACATATGG TGCTGATTTT CGGCCCATTC
GCGATCATCG GGTGCTGCTT CTGGCTGACC AGACCTCCGG CCCTCTCGCA TGAGACATCT
GCCTGGCAAA ACCATCCGTC AACACTGGCA GCTTCGCCAG CCTCATCCGG ATGGTGGCAG
CCAGTCTCCA GTTTGTTCAA CAGGGATCAC AACGCCGAAA AACTCGATAA GGAGTCCCCG
CCCCAGGAAG AAATCACCAA AGACGTACAG GAAGCTGCCA ATCAACTGCG CATTGAATTA
GGTACCGACT TTCAAATCCT CGCTCGAGCC CCTTTTGTCC TGGCGAGCGA TAGTTCCATG
GAAGATCTGC AGTGGATCTA TGCGAATGTC CTGCTTCCGA GCCACCATGC CCTTTCCGTC
AGCTATTTTG ACGCACCAGT CAACAAACCC ATCAAAATCA TTCTGGTGAA ATCGGCGGCA
CGCTGGAATT CACTCCGTCC TCGCTGGCCA GGATTCAGAC CTGTCGAATA CGCAGGTTTT
TATTCGCGAG ATGATCACTG TATCGCCATC AATCTGGAAA CCGGGATCGG TTCATTAGCT
CATGAACTGA CGCATGCACT GATTCATAGT GATTTTGAAA ACTGTCCTGA GTGGTTTGAT
GAAGGCCTCG CTTCATTGCA CGAAGAATGT GAATTCAACG AGACAGGCAC AGCACTCAAA
GGTCTGCCTA ACTGGAGATA TCAACATTTC CGCGAAGCAC TCCATCGGTC AAAGGCTCCT
GCGCTGAAAA CATTGATCAG CCAGCCGTTT GCCGCGTCGA ATTCTCCAGC CACCGAATAT
GCCCACTCGA GGCTGTTCTG CATTTACCTG CAGCAACAGG GAGTACTGGA ATCGTTCTAT
AGGAGATTAC GCCGGTCGAC TGCCGCGAAA GATTCGGCCA TCATTCTCTG TCAACTGACG
AAAACCGTTG ATCTCGACCA GCTGAATTCT CAATTTATCG ATTGGGCCAG GACTCAAACG
CAAGCATCTC AAACTGCTCT TCAAGAGCAT CACGAAACTC TTTCAAAAAC AGATGATGCT
GTCTCTGATT CCACAAATAG CCCTCGGGTG CAGACAAAGC CATTTCTGGA ACCAGCATCG
AGTTTGAATC TGGAACTCGA CTAG
|
|---|
| Protein sequence | MATAPAHQRT RHMVLIFGPF AIIGCCFWLT RPPALSHETS AWQNHPSTLA ASPASSGWWQ
PVSSLFNRDH NAEKLDKESP PQEEITKDVQ EAANQLRIEL GTDFQILARA PFVLASDSSM
EDLQWIYANV LLPSHHALSV SYFDAPVNKP IKIILVKSAA RWNSLRPRWP GFRPVEYAGF
YSRDDHCIAI NLETGIGSLA HELTHALIHS DFENCPEWFD EGLASLHEEC EFNETGTALK
GLPNWRYQHF REALHRSKAP ALKTLISQPF AASNSPATEY AHSRLFCIYL QQQGVLESFY
RRLRRSTAAK DSAIILCQLT KTVDLDQLNS QFIDWARTQT QASQTALQEH HETLSKTDDA
VSDSTNSPRV QTKPFLEPAS SLNLELD
|
|---|
| |