Gene Plim_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2217 
Symbol 
ID9138921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2856985 
End bp2857746 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content54% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003630242 
Protein GI296122464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0335723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTCG ATCTCTTTCG GCTGGATCAC AAGGTCGCTT TGATCACGGG TGGTTCCAGA 
GGGCTGGGAG CGGCCATCTC TTTAGCATTG GCAGAAGCGG GTGCAGATAT CGTCTGTGTC
TCAAGAACCT CACCCACACA GGCACACATT GAAAAAATCC TCTCTCTGGG CCGACGTTTC
CACTTCCTCC CGTGCGATCT CAGTGATCGG GCAAACCGTA CTGGTCTTGT AGAAAAAGCC
AGATTGATTG CGGGATCAAT CGATATCCTC GTCAACAACG CGGGTTTAAC AGCCCGCTTT
CCTCCTGAGG AGTATCCTCT TACTCACCTG CAGACCATGC TGGCGGTTCA TATTGAAGCC
GCTTTCGATC TCGCCCAACA GGTCGCCCCA TCGATGATCC AGCGAGGCTC TGGAAAAATC
ATTAATGTTG GTTCGGTAAT GAGCCATCAG GGTGGCTGGC AGATCCCCGC TTATGCCATC
GCCAAGCATG GGTTGGCCGG ATTGACAAAA TCACTCTGCA ACTCGTGGGC AGCTCAAGGG
ATCAACGTCA ACTGCATCTG TCCGGGCTAT ATGCTCACTG AACTCTCGGG CTCATTAGTC
AACGATCCTG TTCGAGGCCC GCAGATTCTC AGCCGTATCC CTGCAGGGCG CTGGGCACAA
CCCGAGGAAC TGGGTGGTTT GTGCGTTTTT CTGGCCTCCA GTGCATCCAA CTACATGCAT
GGCAGTATCA TCGATATCGA TGGCGGCTGG CTGGCACGCT GA
 
Protein sequence
MILDLFRLDH KVALITGGSR GLGAAISLAL AEAGADIVCV SRTSPTQAHI EKILSLGRRF 
HFLPCDLSDR ANRTGLVEKA RLIAGSIDIL VNNAGLTARF PPEEYPLTHL QTMLAVHIEA
AFDLAQQVAP SMIQRGSGKI INVGSVMSHQ GGWQIPAYAI AKHGLAGLTK SLCNSWAAQG
INVNCICPGY MLTELSGSLV NDPVRGPQIL SRIPAGRWAQ PEELGGLCVF LASSASNYMH
GSIIDIDGGW LAR