Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2217 |
Symbol | |
ID | 9138921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2856985 |
End bp | 2857746 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003630242 |
Protein GI | 296122464 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0335723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCTCG ATCTCTTTCG GCTGGATCAC AAGGTCGCTT TGATCACGGG TGGTTCCAGA GGGCTGGGAG CGGCCATCTC TTTAGCATTG GCAGAAGCGG GTGCAGATAT CGTCTGTGTC TCAAGAACCT CACCCACACA GGCACACATT GAAAAAATCC TCTCTCTGGG CCGACGTTTC CACTTCCTCC CGTGCGATCT CAGTGATCGG GCAAACCGTA CTGGTCTTGT AGAAAAAGCC AGATTGATTG CGGGATCAAT CGATATCCTC GTCAACAACG CGGGTTTAAC AGCCCGCTTT CCTCCTGAGG AGTATCCTCT TACTCACCTG CAGACCATGC TGGCGGTTCA TATTGAAGCC GCTTTCGATC TCGCCCAACA GGTCGCCCCA TCGATGATCC AGCGAGGCTC TGGAAAAATC ATTAATGTTG GTTCGGTAAT GAGCCATCAG GGTGGCTGGC AGATCCCCGC TTATGCCATC GCCAAGCATG GGTTGGCCGG ATTGACAAAA TCACTCTGCA ACTCGTGGGC AGCTCAAGGG ATCAACGTCA ACTGCATCTG TCCGGGCTAT ATGCTCACTG AACTCTCGGG CTCATTAGTC AACGATCCTG TTCGAGGCCC GCAGATTCTC AGCCGTATCC CTGCAGGGCG CTGGGCACAA CCCGAGGAAC TGGGTGGTTT GTGCGTTTTT CTGGCCTCCA GTGCATCCAA CTACATGCAT GGCAGTATCA TCGATATCGA TGGCGGCTGG CTGGCACGCT GA
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Protein sequence | MILDLFRLDH KVALITGGSR GLGAAISLAL AEAGADIVCV SRTSPTQAHI EKILSLGRRF HFLPCDLSDR ANRTGLVEKA RLIAGSIDIL VNNAGLTARF PPEEYPLTHL QTMLAVHIEA AFDLAQQVAP SMIQRGSGKI INVGSVMSHQ GGWQIPAYAI AKHGLAGLTK SLCNSWAAQG INVNCICPGY MLTELSGSLV NDPVRGPQIL SRIPAGRWAQ PEELGGLCVF LASSASNYMH GSIIDIDGGW LAR
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