Gene Plim_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2202 
Symbol 
ID9138906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2839251 
End bp2840036 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content54% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003630227 
Protein GI296122449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACAT TTGCGGAAAA TCAACCCGTG TCAAAAGCGG CCTCGCAGCC AACAACTACC 
GGTCGACCGA TGATTGAGGC CCGTGGCCTC AGCAAGTTTT ACGGCCAGTT CGCAGCCGTC
AGAGACGTAT CGTTTTCGGT TCCTGTGGGG CAGGTCTGCG CATTTCTCGG GCCTAACGGT
GCCGGTAAAT CGACGACCAT GAAGATGCTC ACTGGCTATC TGGCACCGAC CGAAGGCTCA
GCATTTTTAG CTGGCCATTG CATGGAGACA GATCGTCTGG CAGCGGCTCC GCTCTTAGGT
TATCTCCCGG AGAACGGGCC ACTGTATCTG GAGATGACAC CCGAATCGAT GCTGCGTTTC
GCAGGTCAGA CACGCGGTAT GGTCGCCTCA TTACTGCAGA GTCGTCTGGA GTATGTGGCG
AACCGCTGCT CATTGACCTC TGTCTGGCGA AAGCCAATTT CCAAGCTTTC CAAAGGTTAT
CGGCAGCGCG TCGGTATGGC TCAGGCCCTG CTCCATGATC CACAAGTTCT CATTCTTGAC
GAGCCGACCA GCGGTCTTGA TCCCAATCAA ACCCATGATG TTCGCGAACT GATTCTCAGT
CTGGCCAAAA CTAAAACGAT CCTCCTTTCA ACGCATATTC TGACGGAAGT GACAGCCGTC
TGTTCTCATG TGGTGCTGAT CAATGAAGGT CGGCTGGTCT TTAACGGCTC ACTATCAGAA
ATGGTCGCAA ATGCCGAAAT GGAAACTCGT TTTCGCCAAT TGACCGTCGG TGGACGCACC
CCTTAA
 
Protein sequence
MVTFAENQPV SKAASQPTTT GRPMIEARGL SKFYGQFAAV RDVSFSVPVG QVCAFLGPNG 
AGKSTTMKML TGYLAPTEGS AFLAGHCMET DRLAAAPLLG YLPENGPLYL EMTPESMLRF
AGQTRGMVAS LLQSRLEYVA NRCSLTSVWR KPISKLSKGY RQRVGMAQAL LHDPQVLILD
EPTSGLDPNQ THDVRELILS LAKTKTILLS THILTEVTAV CSHVVLINEG RLVFNGSLSE
MVANAEMETR FRQLTVGGRT P