| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2200 |
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| Symbol | |
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| ID | 9138904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2833259 |
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| End bp | 2835946 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003630225 |
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| Protein GI | 296122447 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.170187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGCAA AGCAGCATAA AGCTCTGGTG ATCGTTGAAT CTCCCGCAAA AGCTCGCAAA
ATCGGCGAGT ATCTGGGGAA GGACTATATT GTCCTGGCCA GCATGGGGCA TGTGCGTGAT
CTGCCTTCCG GAGCAGCCGA AGTCCCCGCA GAACTCAAAA AAGAGCAGTG GGCGACTCTG
GGTGTCAACA TCGACCAGCA GTTCGAGCCG GTTTATGTTG TACCCAAAGA CAAGAAAAAG
ACGGTCAAAG AGTTGAAGGA TGCCCTGAAA ACTTGTTCAG AGCTCATTCT GGCAACCGAC
GAAGACCGCG AGGGGGAGAG CATTGGCTGG CATTTGATGA AGCTCCTGGA GCCGAAAGTC
CCTGTCAGCC GCATGGTCTT TTCAGAAATC ACCAAGGACG CCATTCAAAA GGCGATTCGT
AACACCCGCG AACTCGACCA GAATCTTGTG GAAGCACAGG AAACTCGTCG TGTCGTCGAT
CGCTTATACG GCTACAGGCT CAGTCCGCTC CTCTGGAAAA AGGTGGCACC GAGATTATCT
GCTGGCCGTG TTCAATCGGT GGCAGTGCGT GTGCTTGTCA GGCGAGAGAT GGAGCGGCTG
GCTTTTCGTA AAGGGAGTTA CTGGGATCTC AAGGCGGCAT TAGCAACAGC AAGTTCCGCC
CGTTTCGACG CTGCGCTGGC GACTGTCGGC GGCCGGCGTG TGGCTCAGGG ACGCGATTTC
GATGAGTCGA CCGGGCGACT GAAAACCGAT GCCGACGTGT TGCTGCTGGA TGAAGCGCAG
TCGAAGGCTC TTCAAACAAA ACTGGAAGAG AGTCCCGACT GGGTTGTCAG TAATGTCGAA
ACCAGGCTGC AGACGCGTAA ACCTTATCCG CCATTCACCA CCAGCACCTT GCAGCAGGAA
GCCAACCGCA AACTGGGTCT AAGTGCTCGC GAGACCATGC AGATTGCGCA GCGGCTCTAC
GAAAACGGCT TTATCACCTA CATGCGTACT GATAGCGTCA GCCTTTCACA AGAGGCGATC
TCCGCCTCCC GTGCCTGCGT GACGAATCGA TACGGACAAG AGTTTCTGCA CCCGGAAGTT
CGTCAATACA CGACAAAGTC CAAGTCGGCA CAGGAGGCTC ACGAGGCCAT TCGTCCGGCG
GGTGTCGAGA TGAAAACTGC CGAAGAATTG AGTCTCAATG GTCGGGAAGG GGCACTCTAT
GCCATGATCT GGAAGCGCAC CGTCGCGACC CAGATGGCAG AAGCCCAGCT TCGATTTCAG
ACGGTGACAA TCGGTACCCT CGACGTGGAA TTCCGGGCGA CGGGACGGCA TGTCGAATTT
GCTGGTTTCT TCCGGGCCTA TGTTGAGGGA AGCGATGATC CCGAAGGAGC ACTCGAAGAT
TCTGAAGCAG CACTTCCTCC CATGGAGAAA GGTCAAAAGC TGACTTGTAA GGAAGTGCAG
GCTCTGGCAC ACGAAACCAA GCCACCGGCC CGCTACACAG AAGCCACGTT GGTCAAAACA
CTTGAAGAAG AAGGGATTGG CCGTCCCAGT ACTTACGCTT CGATTATCGG GACGATTCAG
GATCGTGGCT ATGTTCGCAA GCAGGGCAAC CAGCTGGTAC CCACATTTAC GGCCATGGCG
GTCACAAAGC TGCTTGAGAA AAACTTCTCG CGGCTGGTTG ACCTGCAGTT TACCGCCCGC
ATGGAGCAGG ATCTGGACGA TATCGCGAAT GGTCAGGCAG AGCGTCTGCC CTATTTGAAG
TCGTTTTACT CAGGTGAAAC TGGCCTTGAT GAGCAGGTCA AGCAGAATGA AGCAGGGATT
GATCCTCGCG AAGCCTGCAC GCTCGATATT GACGGAGTGA ACGCTAAAGT TCGCCTCGGA
AAGTTTGGGG CATTCTTTGA AGGGGAGCGC GATGGTCAGC CGGTCACTGC AACGATCCCC
GACGATATCG CTCCTGCCGA TCTGACGAAT GAATTGGCCG AAAAACTGAT TACCCAGAAA
AGCCAGGGGC CTCAGTCGCT GGGGATTGAT CCGGAAAGTG GCCTGCCCAT CTTTTTGCTG
ATCGGGCCAT TCGGGCCTTA CCTGCAACTG GGGGAAATGA AAGATGGCGA AAAGCCCCGC
CGTGTTTCGA TTCCGAAAAC GCGAGATGTT TCGACCGTCA AACTGGAAGA CGCACTCGAA
TACATGAAGC TCCCTAAGGC GTTGGGGCCA CATCCAGAAA CAGGTAAGGT GGTCAAAGCC
GGGATCGGCA TGTATGGCCC TTATGTGCAT CACGATAAGA CGTACAAATC GCTCGACAAG
ACAGACGATA TTCTGCAGAT GACGATGGAG CGGGCGCTCG AGCTGCTGGC ACAGGCTAGA
GTGCGAGTAC CAGTGGCTCC TCTCAAAGAA CTGGGCGCTC ATCCGGTGGA TGGAGATCCT
GTCCAGATCT TTGAAGGGAA ATATGGCCCT TACATCAAGC ATGGCAAAAC CAACGCGACG
ATTCCCAAAG AGCGGGAACT CGATTCGGTC ACGTTAGAAG AGGCTGTCCG ATTGCTGGAT
GAGAGAGTCG CCAAGGGAGG TGGCAGTACT GGACGCCGGG GTGGCAAGAA AGTGACCAAG
AAAGCTGCGG CGAAAAAGGC GGCTGCTTCG GCAGCGATGG CCACGCCCAA GAAAGCGACA
GCCAAAAAGA AGGCAGCCAA GAAAGCCACA AAGAAGTCTG TTTCCTGA
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| Protein sequence | MAAKQHKALV IVESPAKARK IGEYLGKDYI VLASMGHVRD LPSGAAEVPA ELKKEQWATL
GVNIDQQFEP VYVVPKDKKK TVKELKDALK TCSELILATD EDREGESIGW HLMKLLEPKV
PVSRMVFSEI TKDAIQKAIR NTRELDQNLV EAQETRRVVD RLYGYRLSPL LWKKVAPRLS
AGRVQSVAVR VLVRREMERL AFRKGSYWDL KAALATASSA RFDAALATVG GRRVAQGRDF
DESTGRLKTD ADVLLLDEAQ SKALQTKLEE SPDWVVSNVE TRLQTRKPYP PFTTSTLQQE
ANRKLGLSAR ETMQIAQRLY ENGFITYMRT DSVSLSQEAI SASRACVTNR YGQEFLHPEV
RQYTTKSKSA QEAHEAIRPA GVEMKTAEEL SLNGREGALY AMIWKRTVAT QMAEAQLRFQ
TVTIGTLDVE FRATGRHVEF AGFFRAYVEG SDDPEGALED SEAALPPMEK GQKLTCKEVQ
ALAHETKPPA RYTEATLVKT LEEEGIGRPS TYASIIGTIQ DRGYVRKQGN QLVPTFTAMA
VTKLLEKNFS RLVDLQFTAR MEQDLDDIAN GQAERLPYLK SFYSGETGLD EQVKQNEAGI
DPREACTLDI DGVNAKVRLG KFGAFFEGER DGQPVTATIP DDIAPADLTN ELAEKLITQK
SQGPQSLGID PESGLPIFLL IGPFGPYLQL GEMKDGEKPR RVSIPKTRDV STVKLEDALE
YMKLPKALGP HPETGKVVKA GIGMYGPYVH HDKTYKSLDK TDDILQMTME RALELLAQAR
VRVPVAPLKE LGAHPVDGDP VQIFEGKYGP YIKHGKTNAT IPKERELDSV TLEEAVRLLD
ERVAKGGGST GRRGGKKVTK KAAAKKAAAS AAMATPKKAT AKKKAAKKAT KKSVS
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