| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2149 |
|---|
| Symbol | |
|---|
| ID | 9138853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 2770644 |
|---|
| End bp | 2771444 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
|---|
| Protein accession | YP_003630175 |
|---|
| Protein GI | 296122397 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAACT CTGTGTCCAT CAGTGAGGTT CGGACAGGCC CCATGGCAGC TACCGTCGAT
AAATCGGAAA ATCGAATTCG CCAGATGTTT GGCGAGATTT CCAGTCGTTA CGATCTGATG
AACCACCTGC TTTCCGGTGG GGTGGATTAC TACTGGAGAT GGTTCACCAT TCGTCGCTGC
CAGATCCGTA ATCAAGCTCC CATTCTTGAT GTCTGCACAG GAACGGGTGA TCTGGCAATT
GCTTTCTGGA AACATAGCCA ACAGCAGATT CCGGTGATCG GGACAGATTT CACTCACGAA
ATGCTGGCCA TCGCCCGCAA AAAGACGCGA AAGAACACTC ATCAATCCGC TGGCTCAAAC
TCATCACCCA TCACGTTTAT TGAAGCTGAT ACTCAGGCGT TACCATTTGA GGCGAATCAA
TTTCAGTTAG TTTCAGTCGC CTTTGGACTC CGCAACGTCA CTCGAATGGC GTTGGGTCTG
GAAGAGATGA CCCGTGTCTG CCAACCCGGA GGTCAGGTCG CCATTCTCGA GTTTTCGCTT
CCAGGCAATC CGATCATTCG CAGCGTTTAT TGTTGGTATT TCCGCAACAT TCTGCCACGG
ATTGGGCAAT TGCTGGCTCG TAATCGTCAG GCGGCATACG ACTATCTTCC CAGTTCGGTA
GCCGAGTTTC CTTACGGAGA GGCTCTCGCA GAGCACATGC GCAGTGCCGG CCTGATTAAT
GTCAAGTTCT GGCCGCTGAC TCTGGGAATT GCCACGTTGT ACATTGGCCA AAAGCCCGAC
GGTGGTCATC GTGCCGAGTA A
|
|---|
| Protein sequence | MRNSVSISEV RTGPMAATVD KSENRIRQMF GEISSRYDLM NHLLSGGVDY YWRWFTIRRC
QIRNQAPILD VCTGTGDLAI AFWKHSQQQI PVIGTDFTHE MLAIARKKTR KNTHQSAGSN
SSPITFIEAD TQALPFEANQ FQLVSVAFGL RNVTRMALGL EEMTRVCQPG GQVAILEFSL
PGNPIIRSVY CWYFRNILPR IGQLLARNRQ AAYDYLPSSV AEFPYGEALA EHMRSAGLIN
VKFWPLTLGI ATLYIGQKPD GGHRAE
|
|---|
| |