Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2096 |
Symbol | |
ID | 9138799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2720412 |
End bp | 2722184 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Na+/solute symporter |
Protein accession | YP_003630122 |
Protein GI | 296122344 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.566252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGACAG ACCCTTCACC ATTGGCAATG TTGATCTTTC TGATCTTTGT CGGCTTCACG CTGGGGATCA GTTTCTGGTT TGCTTCCAAA AGTAAATCGT CGGCCTCTTA CTTTGCAGCG GGTGGGCAGA TTCCATGGTT TGTGAATGGT GTGGCTTTTG CCGGTGACTA TTTATCAGCC GCCTCGTTTC TCGGAATTTG CGGGATGATT GCTCGCTACG GCTACGATGG ATTTCTGTAT TCGATCGGAT TTCTGGCTGG CTGGGTGGTG GCATTGTTTG TGATTGCCGA ACCTCTCAAA CGCATGGGGC GATACACATT TGCCGATGCC TTGAACAGTC GTTTTCAATC GCGTGCAGTG ACCTTTGCTG CGGGATTGAG TGCGCTGGTT GTCAGTGCGT TCTACCTGAT TCCACAAATG GTCGGCGCCG GCGCACTCAT TATGCCACTC TTCGGTTTGC CTCACTGGAT GGGTGTGATT GCCGTGGGAC TGGTCGTCAC GGTGATCGTG GTTTCCGCCG GGATGGTGAG TACGACGTAC GTTCAATTCA TTAAGGGGGC GTTGCTGGTG TTCTTCAGTG GTTTGATCAC GATTCTCATA CTCAATCGTG GTTTGACCAG CACAGATGAT CCACTGGCCA TGCAGCCTCA GGTTTTGACG GTGACAGCCT CTGGAGAAAA ACTGATTGAT GGTACTCCTC TGGGAAGTGG TGCCGGACAG GCTCGTATTC GCGGTGTCGG TCAACTGGCG TCGTTAGCCA CAGGGCCCAA TGGCGAAGCG CGCACGAGCA CAGGCCCATT GAGTCCCTGG GGATTTTTGC AGGAATTGAA TCAGTCACAA GTCATTCTGT GGAATGAAAA TACTCAAGCG ACCGAGGAAG GAAAGGTCAC CACCTATTCC CCGATCGTTG TTTCTGGCCA GGAAGTGCTG ATGCCCGGGC GGAGCCCCTT GTTCCAGGGC ATCAAGTCGG ATTCCATCTG GCCCAAACTG AACTTCATCT CGCTGATGCT GGCTCTCTTT GCCGGGACAG CCTCCTTACC ACATGTGCTG ATTCGTTATT ACACCGTTAA AGATGGCCGC GCGGCACGCC AGAGTACCGT GGTCGGGATT GCGACCATTG GTGTGTTTTA CATTCTGACT TTGTTTCTGG GCCTGGGGGC CATGACCGGT GGAAACATTG ATCTGACGGA CAGCAATATG GCGGCTCCCC TTCTGGCTCG AACCTTTGGT GAGCTTCCTT TTGCACTGGT CTCTGCCATT GCATTCACCA CAGTTCTCGG AACTGTGAGT GGTTTGATTG TGGCAGCCAG TGGTGCTGTG GTGCACGATC TCCTGGTGGG GTGGCTGCAG ATTCCATTGA GCGATCATCA GAAAGTTCGC TTTGGAAAAC TCGTCGCTTT GTTGGTCTCT GTAATGGCCA TTGGTCTGGG GATCTGGTTT CAGAAGTTTA ATGCCAGCTT TCTGGTCGGG TGGGCCTTCA GTGTGGCGGC TTCGGCCAAT CTGCCAGCTC TGGTGATGGT CCTCTTCTGG CGGAGGACCA CCGGTGCCGG TGTCGCAGCT TCGGTTCTCG TAGGGATGTT GTCGTCCTTG ACCTGGATTC TTCTCAGCCA GGAGACATTC CAGAACGTCT ACGGCTACGC GAAGAATGAT GCCGCCCAGA TGGCGCTCGT CCCCTTCAGT CAACCCGGGA TTGTGACAAT CCCCCTCGGA TTTCTGGTCG TGATTGTGGT ATCGCTCCTC ACGCGGCCTC AACCTGCGAC TGAAAATCAA TGA
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Protein sequence | MLTDPSPLAM LIFLIFVGFT LGISFWFASK SKSSASYFAA GGQIPWFVNG VAFAGDYLSA ASFLGICGMI ARYGYDGFLY SIGFLAGWVV ALFVIAEPLK RMGRYTFADA LNSRFQSRAV TFAAGLSALV VSAFYLIPQM VGAGALIMPL FGLPHWMGVI AVGLVVTVIV VSAGMVSTTY VQFIKGALLV FFSGLITILI LNRGLTSTDD PLAMQPQVLT VTASGEKLID GTPLGSGAGQ ARIRGVGQLA SLATGPNGEA RTSTGPLSPW GFLQELNQSQ VILWNENTQA TEEGKVTTYS PIVVSGQEVL MPGRSPLFQG IKSDSIWPKL NFISLMLALF AGTASLPHVL IRYYTVKDGR AARQSTVVGI ATIGVFYILT LFLGLGAMTG GNIDLTDSNM AAPLLARTFG ELPFALVSAI AFTTVLGTVS GLIVAASGAV VHDLLVGWLQ IPLSDHQKVR FGKLVALLVS VMAIGLGIWF QKFNASFLVG WAFSVAASAN LPALVMVLFW RRTTGAGVAA SVLVGMLSSL TWILLSQETF QNVYGYAKND AAQMALVPFS QPGIVTIPLG FLVVIVVSLL TRPQPATENQ
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