Gene Plim_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2094 
Symbol 
ID9138797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2718401 
End bp2719345 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003630120 
Protein GI296122342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.136173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGTC GCGCATTCAC TCTCATTGAA CTCCTCGTCG TGATTGCAAT TATCGCGATT 
CTGATTGCAC TGCTGCTCCC TGCTGTTCAA CAGGCACGGG AATCGGCCAG GAGAACTCAG
TGCAAAAACA ACATGAAGCA GTTGGGGTTA GCCTTTCACA ATTACCATGA TGTCCATAAG
CGCTTTCCCG TCGCAGCTGT CGCAGGAGGC GTAGGAGCCA ATCAGGATAC CACGACCAGG
TCGTGGACAT GGTCATGCAT GTTGCTCCCG TTCATCGATC AAACGCCGCT TTACACCGCC
ATCAACGTGG GGAATTCGAA TCTCATTCCT CAAAACACAG CGAATATGAC CAACATTCAG
GATTACTCAA CAGCCAATGG CGGAACCGTT GAACGATTGC TGACGACCAA GATCCCCGGT
TTCATCTGCC CTTCTGCCAA TGGAGGTGAT TTGAATCCGA ACCACAAAAA TCTGGGCGTA
CTCATGTACG GTGGCAGCAA CACGATTTTC CCGGTTCCCA ACCCACCTAA AGCCACGCCC
ATCTCAGATA TTCTCGATGG AACGTCGAAT ACGATCCTCG CTGGTGAAAA AGCATTAATG
ACGGCTCCAT TTGTCGCCAT TGGCTCGACC TGGGGGACGG GGAAAATGTG TCAATTCCGT
ATCAATATCG TTTCACCACA TACTGAGATT AATACCCCGT TTGATGGAAC ATTAGACACC
GCTACGAACT GCTATCTGGA AAATGGTACG CCGGTCAATC TTTTTTCCCG GGTGGCAGTG
GCGAGTCCGC ACACGGGAGG GGCGCATGTC TTGATGTGTG ATGGAACCGT CCGGTTTCTG
AGTGAGAATA TACAATCCAA TCCCGCACTC GGGGCTGATA CAGGAAATTT TCTCTACCAG
AATCTCTTCC AGATTAATGA TCGCAATACG ATTGGTGAAT TCTAA
 
Protein sequence
MSRRAFTLIE LLVVIAIIAI LIALLLPAVQ QARESARRTQ CKNNMKQLGL AFHNYHDVHK 
RFPVAAVAGG VGANQDTTTR SWTWSCMLLP FIDQTPLYTA INVGNSNLIP QNTANMTNIQ
DYSTANGGTV ERLLTTKIPG FICPSANGGD LNPNHKNLGV LMYGGSNTIF PVPNPPKATP
ISDILDGTSN TILAGEKALM TAPFVAIGST WGTGKMCQFR INIVSPHTEI NTPFDGTLDT
ATNCYLENGT PVNLFSRVAV ASPHTGGAHV LMCDGTVRFL SENIQSNPAL GADTGNFLYQ
NLFQINDRNT IGEF