Gene Plim_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2080 
Symbol 
ID9138783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2697527 
End bp2698264 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content55% 
IMG OID 
Productphosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 
Protein accessionYP_003630106 
Protein GI296122328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTC TGCCGGCAAT CGATTTGCGT GGAGGCAAAT GTGTGCGACT TCGCCAGGGT 
GATTATGCCC TGGAGACCGT TTTTGGTGAT GACCCGGTCG CCATGGCCCA AAAATGGGCA
GCCACAGGTG CAGACCGGCT TCATCTGGTC GATCTTGATG GAGCGAAAGC CGGATATCCG
GTGAATCATG AAATCGTGAG AGCGATTGTC AGTGAGCTGT CGATTCCCTG TGAGTTGGGA
GGAGGTTTTC GTTCCGAGGA ATCCGTGCGA TTCATGCTGG AAGATGTTGG CCTGGACCGC
GCGATTATTG GTACACAGGC ACTCAAAGAA CCGGCGTGGT TCAAATCGTT AGTGGAAAAG
TATCCCGGGA GAATTGCCCT GGGATTGGAT GCTCGCGATG GCAAAGTGGC CACGGCAGGT
TGGCTCGAAG TCTCGGCCGT TTCGGCACTG GAATTAGCTT CGCAATTTGT CGATCTCCCG
CTCGCAGCTG TAATCTATAC CAACATTGCC AACGATGGGA TGATGCAAGG TGTCGACGAA
GGGACCATTG CCGACATGCA GCGTCTGGCC GATCTGGGCT TTTCCGTGAT TGCTTCAGGT
GGGGTGACGA CTCTGGACGA TGTGCGGCGT CTGGAGGCTG TTCATAAGCA GCAGCCCAAT
CTGGTCGGAG CAATTATCGG TCGCGCGATT TACGAAGGAA CGATTCGCGT CGAAGAGGCG
GTGGCTCTCA CGCGCTGA
 
Protein sequence
MEILPAIDLR GGKCVRLRQG DYALETVFGD DPVAMAQKWA ATGADRLHLV DLDGAKAGYP 
VNHEIVRAIV SELSIPCELG GGFRSEESVR FMLEDVGLDR AIIGTQALKE PAWFKSLVEK
YPGRIALGLD ARDGKVATAG WLEVSAVSAL ELASQFVDLP LAAVIYTNIA NDGMMQGVDE
GTIADMQRLA DLGFSVIASG GVTTLDDVRR LEAVHKQQPN LVGAIIGRAI YEGTIRVEEA
VALTR