Gene Plim_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2077 
Symbol 
ID9138780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2693210 
End bp2694394 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content52% 
IMG OID 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_003630103 
Protein GI296122325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.582044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACAC GATTTCTCGA ACATATCTCC GGGCAACTGG ATCAGATTCG CAGTGCCGGA 
ACTTATAAGT CTGAGCGAGT CATCACGACT CCGCAGAATT CGAGCATTCA AGTTGCAGGG
GGAAAGCCCG TCCTGAACTT CTGCGCGAAT AACTATCTGG GATTGGCACA ACATCCCGCA
GTTCAGGCGG CGGCTGCCAA GGCTCTGGAA GAATGGGGCT ACGGGCTTGC CTCAGTAAGA
TTTATCTGTG GTACTCAAGG ACTACATAAA CAACTTGAAA GTGCTCTCAG CAAGTTTCTC
GGCATGGAGG ATACCATTCT CTACTCCTCC TGCTTCGATG CGAATGGCGG GCTGTTCGAA
ACATTGCTGG GGGCGGAAGA TGCTATCATC TCTGATGCAC TCAACCATGC GAGCATCATC
GATGGCATCC GCTTATGTAA AGCTCAACGG TTTCGCTATG CCAACAACAA TATGACCGAG
CTGGAAGAAC GACTTAAAGA AGCCTCCGGG GCTCGTTTTC GCCTCATCGC GACAGATGGC
GTTTTCTCCA TGGATGGTTA CATCGCCAAT CTTCCCGCAA TCTGCGAACT GGCGGATAAG
TACGATGCGA TGATTATGGT CGATGATTCT CATGCTGTTG GTTTCACTGG CCCCAACGGG
CGCGGAACGC ACGAATACCA CAACGTCATG GATCGCATTG ACATTATGAC CGGTACGCTT
GGTAAAGCCC TGGGAGGTGC CAGTGGAGGC TATACCAGTG GACGCCAGCC GATCATTGAT
CTCTTGAGAC AACGTTCAAG ACCATACCTC TTTTCGAACA CTCTCGCACC TCCCATTGCT
GCGGCTTCGC TCAAGGCATT AGAGCTTCTG AGTGAATCGA CTCATTTGCG TGATCAATTG
GAGGCCAATA CGGTCTGGTT TCGGAATGCA CTGCAAAGTG CGGGGCTGAA GGTGCTTCCG
GGGACGCACC CCATCTGCCC CGTCATGCTG GGTGATGCTG CCCTGGCGGC TCAATTTGCA
GATCGCATGC TAGCCGAAGG AGTTTATGTC ATCGGCTTCT CCTACCCGGT CGTTCCTCAA
GGACAAGCCC GCATTCGTAC ACAGATTTCA GCGGCTCACT CGCAACACGA TCTGGAAACA
GCAGCGGCAG CATTTACTAA AGTCTGGAAA GAGCTGGCTG TCTAA
 
Protein sequence
MSTRFLEHIS GQLDQIRSAG TYKSERVITT PQNSSIQVAG GKPVLNFCAN NYLGLAQHPA 
VQAAAAKALE EWGYGLASVR FICGTQGLHK QLESALSKFL GMEDTILYSS CFDANGGLFE
TLLGAEDAII SDALNHASII DGIRLCKAQR FRYANNNMTE LEERLKEASG ARFRLIATDG
VFSMDGYIAN LPAICELADK YDAMIMVDDS HAVGFTGPNG RGTHEYHNVM DRIDIMTGTL
GKALGGASGG YTSGRQPIID LLRQRSRPYL FSNTLAPPIA AASLKALELL SESTHLRDQL
EANTVWFRNA LQSAGLKVLP GTHPICPVML GDAALAAQFA DRMLAEGVYV IGFSYPVVPQ
GQARIRTQIS AAHSQHDLET AAAAFTKVWK ELAV