Gene Plim_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2047 
Symbol 
ID9138750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2658660 
End bp2660552 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content54% 
IMG OID 
Productchaperone protein DnaK 
Protein accessionYP_003630074 
Protein GI296122296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTTC AGGAAAAAGT GATTGGAATC GACTTGGGGA CGACCAACTC TGTCGTCTCC 
GTGATGGAAG GTGGTGAAGT CAAGGTCATC GCCAATCAGG AAGGGAACCG GCTGACACCC
AGTATCGTGG CCTTCACTGA TAAAGGGGAC AGGCTCGTGG GTGATCCTGC GAAACGTCAG
GCCGTCACAA ACCCTAAGAA TACGATTTAC TCCGTGAAGC GTTTCATGGG GCGACGCCAC
AGTGAAGTCG AGTCGGAAGA GAAACTCGTC CCTTACAAGG TGGTCGGTGG CCCCAGTGAA
TATGTGCGCG TCGAAGCGGG TGGGAAGGAA TATACACCTC CCGAAGTTTC AGCGCTTGTG
CTGCGGAAAT TGAAGGAAGC TGCGGAAGCT TACCTCGGAC ACACCGTGAC ACGCGCTGTG
ATCACTGTCC CTGCGTACTT CAATGATGCA CAGCGCCAAG CCACCAAAGA CGCCGGTGAA
ATTGCCGGGT TGAAGGTCGA ACGCATTATC AACGAGCCCA CCGCTGCTGC GCTGGCTTAC
GGCTTACAGA CCAAGAAAGA CGAAAAGATC GCGGTCTTTG ACCTGGGTGG CGGTACCTTT
GATATCTCCG TCCTCGAAGT TTCCGGCGAT CTCGTCGAAG TTTTGAGTAC CAATGGCGAT
ACGCACCTGG GTGGTGACGA TTTCGATCAG GCGTTGCTCG ATTTTATCGC TGATAAGTTC
AAAGCTGAAA ATGGGATTGA ACTGCGCAAA GATCCGATGG CGCTGCAGCG TCTCCGCGAA
GCCGCTGAAA AGGCCAAGAA GGAACTCTCT TCCTCACAAA CGACCGATAT CAATCTCCCC
TTTATTACAG CTGATGCTTC GGGTGCGAAG CATTTGCAGT TGAATGTCAC TCGGGCTGAA
TTTGAAAAGC TGATTGATCA CCTGATCGAT CGCTGCAAGA AGCCTGTGGA GCAGGCCCTC
AAGGATGCCA AACTCAAACC TTCCGACATC GATGAAGTGG TGCTGGTCGG TGGTTCGACT
CGCGTTCCTA AAGTTCAGGA ATTCGTGAAG AGCTATTTCG GCAAAGAGCC CAATCGCTCG
GTGAATCCTG ACGAAGTTGT GTCCATTGGT GCCTCAATTC AAGGGGGCAT CATTGCTGGC
GACGTCAAGG ATATGCTTCT GCTCGACGTG ACCCCGCTGT CGCTGGGGAT CGAAACGGAG
GGTGGGATCA TGACCAGCCT TGTCGAACGA AACACGACGA TCCCGACAAG CAAGAAGCAG
GTGTTCTCAA CGGCAGCCGA TGGTCAGACA GCAGTCACTG TGAGTGTCTT TCAGGGCGAA
CGTCCGATGG CGCGGGATAA TCGTCTCCTG AGCCAGTTCA ATCTGGATGG GATCCCCCCT
GCACCACGCG GTGTTCCTCA AGTTGAAGTT TCTTTCGATA TCGATGTCAA CGGGATTGTC
AGCGTCAAAG CCAAGGACCT CGGTTCAGGC AAGGAGCAGT CAGTCAAGAT CCAGAATGCC
AGCGGTCTGG ATACTGCCGA GATTGAACGG ATGAAGCGAG ACGCTGAGTC TCATGCGGGC
GACGACAAGA AACGACGTGA ACTGGCCGAA GCAAGAAATA AGGCTTCGAC CTCGGCATAC
GAAGTTGAGA AGTTGCTCAA AGAGCATGGC GAAAAGCTCG ATGCGGGCTC GAAGTCGGCC
ATTGAAGCAG CGATCGCTCG CGTCAAGCAG GTTGAAACCG GCGAAGACGT CGCAGCCATT
AACACCGCAG TCGAAGCTCT GCAGCAGGCC AGCTATGCCA TGGCGCAGCA TATCAATGCT
CCCGGTGGTG CCGCAGGTGC TGCTGCCGAT GATGGTGCTG CTTCCAAGGG AGGCGACGAC
GTCATCGATG CTGAATTTGA GAAGAAGAGT TAA
 
Protein sequence
MAVQEKVIGI DLGTTNSVVS VMEGGEVKVI ANQEGNRLTP SIVAFTDKGD RLVGDPAKRQ 
AVTNPKNTIY SVKRFMGRRH SEVESEEKLV PYKVVGGPSE YVRVEAGGKE YTPPEVSALV
LRKLKEAAEA YLGHTVTRAV ITVPAYFNDA QRQATKDAGE IAGLKVERII NEPTAAALAY
GLQTKKDEKI AVFDLGGGTF DISVLEVSGD LVEVLSTNGD THLGGDDFDQ ALLDFIADKF
KAENGIELRK DPMALQRLRE AAEKAKKELS SSQTTDINLP FITADASGAK HLQLNVTRAE
FEKLIDHLID RCKKPVEQAL KDAKLKPSDI DEVVLVGGST RVPKVQEFVK SYFGKEPNRS
VNPDEVVSIG ASIQGGIIAG DVKDMLLLDV TPLSLGIETE GGIMTSLVER NTTIPTSKKQ
VFSTAADGQT AVTVSVFQGE RPMARDNRLL SQFNLDGIPP APRGVPQVEV SFDIDVNGIV
SVKAKDLGSG KEQSVKIQNA SGLDTAEIER MKRDAESHAG DDKKRRELAE ARNKASTSAY
EVEKLLKEHG EKLDAGSKSA IEAAIARVKQ VETGEDVAAI NTAVEALQQA SYAMAQHINA
PGGAAGAAAD DGAASKGGDD VIDAEFEKKS