Gene Plim_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2015 
Symbol 
ID9138718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2613864 
End bp2615015 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content52% 
IMG OID 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_003630042 
Protein GI296122264 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.92393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTTTTG ATGATGATTT CAGACAACGG TTTTCTCCTC AGAACGGTAC CGGTGTCAGT 
AACTGGCTGG TGGCTCTGTT GCTCTTTTCT GGTGGCCTGT GGGCGTTAAG TTCTGCTGGA
ATCTGGCCTT TCAGTCGCAA TTGGGTCAAT GCCGTTTCCC GCCCGATCAC TCCTCGCGGT
GATTTGTCTG ACGATGAAAA GACCACCATC GAGATCTTTC GTGAATCTCT TCCCAGTGTG
GTTTACATCA GCAGTCTGAC AGTGAATCGA GCCCAGGCGA GTCCCAATCC TGTGCAGATT
ACGCGTGGTA CCGGAAGTGG ATTCGTCTGG GATCATCAGG GGCATGTCGT CACGAATTAT
CACCTCATCC GCAATGCACA ATCTGCTACG GTAATTCTCG CTGATAACTC AGAATGGGAT
GCGGCACTCG TGGGTTATGA ACCGGATCGA GATCTGGCGG TCCTGAGGAT CAAGGCACCT
GCCAGCCGTC TGCGTCCAAT TCCTGTGGGA ACATCTGATG ATCTCCAGGT GGGTCAAAAG
GTTTTCGCGA TCGGTAATCC CTTTGGCTTC GATCACACGT TGACGACCGG TGTCATCAGT
GGATTGGGCC GCGATGTGCC CGGGGCGACG GGAGAGACGA TTCGCGGCAT GATTCAGACC
GATGCAGCCA TCAACCCGGG AAATTCAGGT GGGCCACTGC TGGATAGTGC CGGGCGATTG
ATCGGTGTGA ACACAACCAT TCTCAGCAAC TCAGGTGGCT CGGCGGGCAT CGGGTTTGCC
ATACCTGTCG ATACAGTGAA TGCCTATGTT CCAGAACTGA TCAAGCATGG CTGGAACGAA
CGCCCCGAGT TGGGGATCAT TTTCATGTAC GATACCTTTG CTCGGCGTCT CGGAGTTACC
TCGGGTGCAC TGGTGAAACA TGTCATCGAA AACAGTGCAG CAGCACGAGC AGGGATTCGC
CCAATGTGGA GCGATGAGGA TGGCGATCTC ATTCTTGGCG ACATTATTGT CCAGATGGAT
GACTTCCCAA TCACTGGAGA AATGGATGTC TTTCGAACTA TGGAACGGTT TAAGATCAAT
CAGGTCATTC AGGTGAAAGT GATTCGAGAC GGTGATTTGA AGAGCATCTC CCTCAAACTC
GATAATCCGT AG
 
Protein sequence
MAFDDDFRQR FSPQNGTGVS NWLVALLLFS GGLWALSSAG IWPFSRNWVN AVSRPITPRG 
DLSDDEKTTI EIFRESLPSV VYISSLTVNR AQASPNPVQI TRGTGSGFVW DHQGHVVTNY
HLIRNAQSAT VILADNSEWD AALVGYEPDR DLAVLRIKAP ASRLRPIPVG TSDDLQVGQK
VFAIGNPFGF DHTLTTGVIS GLGRDVPGAT GETIRGMIQT DAAINPGNSG GPLLDSAGRL
IGVNTTILSN SGGSAGIGFA IPVDTVNAYV PELIKHGWNE RPELGIIFMY DTFARRLGVT
SGALVKHVIE NSAAARAGIR PMWSDEDGDL ILGDIIVQMD DFPITGEMDV FRTMERFKIN
QVIQVKVIRD GDLKSISLKL DNP