| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2009 |
|---|
| Symbol | |
|---|
| ID | 9138711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 2604008 |
|---|
| End bp | 2608588 |
|---|
| Gene Length | 4581 bp |
|---|
| Protein Length | 1526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003630037 |
|---|
| Protein GI | 296122259 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGAC TCGCCGGTGA AGCTGCAAAA CTAGGTGATC ACTATGAAGC GGTCTGGACC
GTTGACGCTG TTCTTGACCT ATTTGAGGGC CGATTTAAGT CGATCACTGT GGAGCCATTC
GGCGACGAAT CGGTCGGCGT GGAATTCCAC CTCGAAACGA ATGATGGCGC GTTCCAATTC
CATTCTGTGA AACGCCAGAA GCAAGGCGGG GATTGGTCCG TTGCCGATCT GTGTCGACAA
GACAAGAACA CCGGCAGAAG CATTCTTGGA GATCTACTTA CCAAGCGGAT TCAGTGGCCA
AACGCCGAAA CACGATTCGT ATCCGCAACT GGTGCGAACG AACTTCGCGA ACTGGAGGAG
CGTGCGAAGA CGCCAACAAA TGTTGATGAA TTCAGGAACA TTTTGACGGG GAAACTCCGA
TCAGAGTTTG ATGCGCGAAT CGTTCCGATC TGTGCCGGAG ATCCTAACTC CGCATTCGCG
GCGCTGAAAA CGCTTGAAGT CATTCCACGC GGCCACAAGG ACTTGACACG CTCCGTGAAG
CGACGAATCG ATGGACTCTT CAACCGCACA GACGGTTCAC GTCTAGATGC CGACGATGTC
CGTCGAATGA TCGTAGAGTT CATTCTTGAG AACCTTGGTC CAAAAATCGA CAGAGACCGG
CTTCGTTCGT TTTTTTACGA GAAGGGAATT GGAGTTCAGA ATTGGAAATT GGACACCACG
ATCAATGATG CGGTCACCGC GGCAAATCGC CGCTATCTCT CGGTCACGGA AACCGAACTC
ATCAACTCCG CACAGATAAC TCGTGATGTT GTCGGGCAAA TAATCGACAC GATCACAGGG
GCGGAATCGC GCGGAGTATT GCTGGTCGCA CCGGGTGGAT TTGGAAAGAG CTGTGTTTTG
GCTCAGTGCA TAGCGCAACT CTCGACGAGC AACATGCCAC ATCTGTGTTT GAGGATGGAC
TTGTTCACAC CCTGCCATAC TGCGAGCCAA CTCGGCGAGC AGATGGATCT GCGCGCATCC
CCGGCAGTCG TCCTTGCGGG AATAGCGGAT AACGCTCCGA GTGTCTTACT TATTGATCAG
CTGGATGCAA TGAGTCTCGT CTCGGGACGT AATCCCCAAA TGTGGGAGGT GTTTCGTGAT
CTATGTGAGG ACGTCAAAAA CTATCCACAG ATGAAAATGA TTCTGGCATG TCGTGAGTTT
GATCTTGAAC ATGACCATCG TTTGCGAACC TTGGATAATT CCAAATCGGG GTTCTCCAAA
ATTCCGCTTT CAAGGCTTAC CGAAGCTGAG GTCCATGCCT CACTGGGTTT GGCAGGACAT
GGAGAAGTGA AGCTCAATCA ACAACAGCTT GAAATCCTGG GCACTCCGTT TCATCTTCTG
CTGTTCTTGC AGGGTGATCC GACCCGTGGC TTCAACACAG TCAATGAATT GTACGATCGG
TATTGGGATC GCAAACAACA GAACTTGAGG ACGAATCTTG GTGGCGAACC TCGCTGGAAC
AAGGTGATCG ATGCCTTGAC GGCCAAAATG AGCGAACAGC AACTTCTGTT CGCGCCGATA
TCAGTTACGG ACGAATGGCA GCACGACGCC CGAGCCATGG CTTCCGAACA TGTCCTGATT
GAGGTTCCGA ACAAACGCCA CTATCGGTTT TTCCATGAGT CTTTCTTTGA TTACGCATTT
GCCAGACGAT TCTGCGCCTC GGGGCAAAGC GTCATCGAAC TTCTCGAGTC ATCCGAGCAG
CATCTGTTCC GCCGCGCACA GGTACGTCAG ATTCTGGCGT TTCGTCGAGA AGAGGATTTC
AGCCAGTACA TCAACGACAT TCGTAGCATC CTTGAGTCGC CAACTATTCG CTTTCACATC
AAGCGGATGG TTGCGTCTGG TTTCAAGCAA GTTGGCCAGC CGAGTCGGGA GGAATGGCAA
CTACTTGAAG CGTACGTTTT GGATGGCGAC CTTTCCCGGT ACGTCTCTGC TGCTCTACGT
GATCACATTG GATGGTTCAA TTTACTAGAC TCGCTTCATG TATTCAAGAA TTGGCTCGCG
TCCGACGATT CCCGGTTCAA TAACGCAGCG ATCTGGTTTC TCGAATCACA CCACCTGCAT
GATTATAGAT CTGCAGAAAT TGCCCGACTA ATTCGTCCGT ACGTGACTCG CGACGGTGAT
TGGCGGCAGC GAATCCAACG GATAATGTCT TGGGGGCAAG CTCACAAAAG TGATGAAATG
GCTGCGATCT ATCTCGAACT GATCGAGAAA GGCGACTACG ACGACTATGA GAGCAGAGTC
AGCGGAGGGG ACTTTTGGAG CCAGCATTAC AATGCAGAGA ACGAGTCACC CCGATTCGTG
ATCGATGTGC TGGCAACATG GTTCGATCGG GCAGTTCAAC AATTTGACGA TGGCGTGACG
TGGAATTTTC TCGACAAATG CCGGCTCAAT CATTCGCACA CTGGTGCAAT AATGGTTGGT
AAAGCAGCTG CCGATGAACC AGAGTACTTC GTCGAACGAA TGCTTCACCG TGTTCGTGCG
ACGGTTTTGG AGACTGAAGT TCGCGGTGCG GGCATCCTGA ATAATCGTGC TTGGCCATGG
CTTTCGAACA ATGGCGATCC ATTCGATATA AATGACTCTG TCCTAATTTC ATTGCGAAAG
TCGCTCCAGC ATCTAGCGTT GCACAAGGTT GATGCGTTTC GGCGCCACGT GGCCACGATT
GAGACACATT CACATCAGAC GTTCGGGTAT TTGTTACTTC GATCATGGGC TGAGAATCCC
GAGGAATTTG CAAACGACTG CGCCGAATAC TTTGTTGCCG ACCAACGCCG ACTCAACATC
GGTTATGGAA GCTGGTCGGG CGGTGGAGAC GGAACGGGCG AGAGTGCGAT CAGTCGGATT
GCCTTAAAAG CGATCTCGCC AAAGTGCTCT TCTGAATTGT TTCAGCAACT GGAGTCGCAA
ATCATCGGTT TATGCGACGA ATATGAGAAG AAAACGCCGC GATGGCGAGG CTCGTCCGAG
TTACTCCTGC TTCGCTCGCT CGACCGCTTA CGTGTTTCTA ACCGTGTCGC ACTCAGGATC
GAGGAACTAG AAAGGAAGTT TCCGAGGCTG TCGGATGCTA TTGTCAAAGA GGACAACACG
AGTTTCGTCA GCAGGGTGGG CCCACCTATA GAGCAAGCAA GTGCAGAAAA GATGACGGAC
GACCAATGGG TCTCCGCGAT GAGAAAGTAT GACGGCAAGA CCGATCGATT CGGAGGCGGT
CCGGAAGAAC TTTCCCGCTT ATTGGAAGAG TTCACCCGCA AAGAACGAAC CCGGTTTGCC
TCCTTGGTTA CGAAGATGCC CGTCGATGTC CATCCGCTAT ATTTTTCAGC CATTCTAAAC
GGTCTTTTCG GTCGCTTTGG AAATCTCAGC GAGGAAGAAA AGAAAGTTGA TAATGAGCAG
ATCTCTGCAT TTCCAACAGA AATGTTTTTG ACTGTAGTTT ATCGTGTTCA CGATTTGCCA
AATCGACCGT GTGGATCGGC GATTTCAAAT TGTATCCGTA GGCTGTCCGC TCGATCGCTA
CCGCTAAGAG CTCTAGAGAT TGTGTGCTAT TACGCTACCA AAGACCCCGA CCCGTGCACC
GATATCTGGC AGGACACAGG TGATGGGAAG AATTATTACG GAGGCGATCC TCATTCGCAC
GGCATCAATA GCGTGCGCGG GCAAGCGGCC GAAGCGTTGT CGTCTCTTCT TTTTAATGAC
TACACTCGAT TCAATTCACT TCGTCCCACG TTGGAATTAT TGACTCAAGA TCCAATCATA
TCTGTACGGA CGTGTGCAAT AGATACATTT CTGCCGCTTC TCAACTTTGA CCGCGACACT
GCGGTAGAAT TATTCTTGAG AAATTGCCGC CAGTCTAAAG ACATTTGTGC AACATATCCC
TTTGATAACT TCATCTACTA TGCAATTTAC TCTCATTACA CCCAACTCCG TGAACTGCTT
CGATATGCGC TGTATTGCCA TAACTCTAAA GCTGTTGAGA ATGTCGCCCG TCGCATTGTT
GTGGCTGAAC TTCAAGGTGT TGCGATAGGA ACTGATGGGG ATGATATTCG ATCTGGCAGT
GTTACTATGC GAAAGGCCGC TGCCGACGTT TATGCGAGAA ATCTCTCAGA AGAAGTTGTT
GGAAACAAAT GTGCTGAGCG ACTGGAAGAG TTTCTCGCCG ACGAATCTGA GGACGTCCGT
CAAGAAGTGT CTAGTGCGTT CTTCAATATG TCGGGTGAAA GGCTGTTACA GTTGGAGGAT
TTCATAGCCC GGTTTGTCGA AAGCCGCTGT TTTGAAAGTG ATCCCTACCG CCTGCTTCAC
GCTCTCAATC AGTCAAGGGT TCAGCTTCCT CATATTATTT GCCGTGCTGC GGAACGAATT
CTCGAATTTC TTGGCGAAGA TGGAACACAC GTCGCTAGTC GCGGGGCGAT GTCGGCAAGC
GAGATTTCAA CACTCATCGT GCGTCAGAAC GAACAGGCGA CTGACGACGC AATCAAGAAA
TGGTGTTTGA ACTTAATCGA TGAAATGGAA CGAGTTGGCT TTCTCGGTAT TGGAGAGGAA
CTGTCAAAGG TTGATCGCTG A
|
|---|
| Protein sequence | MPRLAGEAAK LGDHYEAVWT VDAVLDLFEG RFKSITVEPF GDESVGVEFH LETNDGAFQF
HSVKRQKQGG DWSVADLCRQ DKNTGRSILG DLLTKRIQWP NAETRFVSAT GANELRELEE
RAKTPTNVDE FRNILTGKLR SEFDARIVPI CAGDPNSAFA ALKTLEVIPR GHKDLTRSVK
RRIDGLFNRT DGSRLDADDV RRMIVEFILE NLGPKIDRDR LRSFFYEKGI GVQNWKLDTT
INDAVTAANR RYLSVTETEL INSAQITRDV VGQIIDTITG AESRGVLLVA PGGFGKSCVL
AQCIAQLSTS NMPHLCLRMD LFTPCHTASQ LGEQMDLRAS PAVVLAGIAD NAPSVLLIDQ
LDAMSLVSGR NPQMWEVFRD LCEDVKNYPQ MKMILACREF DLEHDHRLRT LDNSKSGFSK
IPLSRLTEAE VHASLGLAGH GEVKLNQQQL EILGTPFHLL LFLQGDPTRG FNTVNELYDR
YWDRKQQNLR TNLGGEPRWN KVIDALTAKM SEQQLLFAPI SVTDEWQHDA RAMASEHVLI
EVPNKRHYRF FHESFFDYAF ARRFCASGQS VIELLESSEQ HLFRRAQVRQ ILAFRREEDF
SQYINDIRSI LESPTIRFHI KRMVASGFKQ VGQPSREEWQ LLEAYVLDGD LSRYVSAALR
DHIGWFNLLD SLHVFKNWLA SDDSRFNNAA IWFLESHHLH DYRSAEIARL IRPYVTRDGD
WRQRIQRIMS WGQAHKSDEM AAIYLELIEK GDYDDYESRV SGGDFWSQHY NAENESPRFV
IDVLATWFDR AVQQFDDGVT WNFLDKCRLN HSHTGAIMVG KAAADEPEYF VERMLHRVRA
TVLETEVRGA GILNNRAWPW LSNNGDPFDI NDSVLISLRK SLQHLALHKV DAFRRHVATI
ETHSHQTFGY LLLRSWAENP EEFANDCAEY FVADQRRLNI GYGSWSGGGD GTGESAISRI
ALKAISPKCS SELFQQLESQ IIGLCDEYEK KTPRWRGSSE LLLLRSLDRL RVSNRVALRI
EELERKFPRL SDAIVKEDNT SFVSRVGPPI EQASAEKMTD DQWVSAMRKY DGKTDRFGGG
PEELSRLLEE FTRKERTRFA SLVTKMPVDV HPLYFSAILN GLFGRFGNLS EEEKKVDNEQ
ISAFPTEMFL TVVYRVHDLP NRPCGSAISN CIRRLSARSL PLRALEIVCY YATKDPDPCT
DIWQDTGDGK NYYGGDPHSH GINSVRGQAA EALSSLLFND YTRFNSLRPT LELLTQDPII
SVRTCAIDTF LPLLNFDRDT AVELFLRNCR QSKDICATYP FDNFIYYAIY SHYTQLRELL
RYALYCHNSK AVENVARRIV VAELQGVAIG TDGDDIRSGS VTMRKAAADV YARNLSEEVV
GNKCAERLEE FLADESEDVR QEVSSAFFNM SGERLLQLED FIARFVESRC FESDPYRLLH
ALNQSRVQLP HIICRAAERI LEFLGEDGTH VASRGAMSAS EISTLIVRQN EQATDDAIKK
WCLNLIDEME RVGFLGIGEE LSKVDR
|
|---|
| |