Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1994 |
Symbol | |
ID | 9138696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2588863 |
End bp | 2589651 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003630023 |
Protein GI | 296122245 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCCG AGAATTCTCC ACCAGATTCA CCGCTTGTCA TTCATGATAT GACGGTGGCT TACGGCCGAA AGCCTGTCCT CTGGAATATT GACTATGTCT CACCCAGTCG AAAACTGATC GCGATTGTTG GCCCCAATGG GGCTGGCAAA AGTACCCTAT TGAAGGCGGC TTTGGGTTTG ATCCCCCGGC AGAATGGAGA GGCTCTGTTT TTTGGCCAGC CTTATCAGGC AGTACGACAA AAAGTGGCCT ATGTTCCGCA GCGATCCAGT GTGGACTGGG ATTTCCCGAT CAGTGCCCTC GAAGTGGCGG CCATGGGCTG TTACGGACGT ATGGGGTGGT TTCGCCCAGT GAATCGCGAT GCCAAAAATA CGGCTTTGGC AGCTCTCGAA CAGGTAGGTC TGGGAGATGT GGCCAGACGT CAGATTGGTC AACTTTCTGG AGGCCAGCAG CAGCGGGTGT TTCTTGCCAG AGCTCTGGCT CAGGATGCCG ATCTTTATCT GATGGATGAG CCGTTTGCTG CCGTCGATGC CACGACAGAG CAATCGATTG TGTCCATGTT GCAGGCATTG AGAGATCGAG GCAAGACGAC GATTGTCGTG CATCACGATC TGCAGACGGT CTCGGAATAC TTTGACGAAG TGCTGTTGTT AAACTTGCGG CTGATTGCAG CGGGAGCGGT TTCTGAAGTG TTGACACCTC AAAATCTGAA GGCCACATAC GGTGGTCAGC TTTCGATTCT GGATGCAGTG GGCCAGCGGA TGTCAGCGAG ACAATCCGTG ACAAGTTAG
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Protein sequence | MNAENSPPDS PLVIHDMTVA YGRKPVLWNI DYVSPSRKLI AIVGPNGAGK STLLKAALGL IPRQNGEALF FGQPYQAVRQ KVAYVPQRSS VDWDFPISAL EVAAMGCYGR MGWFRPVNRD AKNTALAALE QVGLGDVARR QIGQLSGGQQ QRVFLARALA QDADLYLMDE PFAAVDATTE QSIVSMLQAL RDRGKTTIVV HHDLQTVSEY FDEVLLLNLR LIAAGAVSEV LTPQNLKATY GGQLSILDAV GQRMSARQSV TS
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