| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1956 |
|---|
| Symbol | |
|---|
| ID | 9138658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2541461 |
|---|
| End bp | 2542765 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003629985 |
|---|
| Protein GI | 296122207 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACTG AAACATTGAC TGACTCACCG CTCGACAAAA AAAGTTCTCG CTCAGCACTC
GTCCTCGTCT TTTTGACGGT CTTCATCGAT CTCCTCGGCT TCGGGATCGT GCTGCCACTT
TTGCCCCGAT ATGCCGAACA CTTTCAAGCG ACAGGCCTGC AGCTTTCAAT GCTCTCGGCG
AGCTTTTCTG CGATGCAGTT TCTCTTTTCG CCTCTCTGGG GCCGGCTGTC TGACCGAATC
GGCCGTAGAC CCGTGTTGAT CTTTGGCCTC GCCAGCACGG CCTTTTTCTA TCTGTTGTTT
GGTCTCGTCA CTCAATGGGG TGTGCATGGG ACGATTCTTG GTCTTTCACC ACTGATGTGG
CTCTTTATCA CCCGCAGCGG TGCCGGGATC TCGGGCGCGA CGATTTCAAC GGCCCAAGCG
TACATTGCCG ACTGCACTGG CAAAGCCGAG CGTGGCAAAG GGATGGCCCT GATTGGTGCT
GCCTTTGGGA TGGGGTTTAC GTTTGGGCCA CTTCTCGGTG CGATGTTTGT GAGCAGTGAT
CCGCAAAGTA CGCCAACTCC GCTACCGGCA TTTGCTGCAG CATCGCTGTC ATTCATGGCA
TTTCTGGCAG CGCTGTTTCT GCTCCCGGAA TCACTACCAG CGGCTGACCG TATCAATCAT
CTCGAAACGA CCGAAATCAG CCCACTCTCC CAACGATTAA CAGCAGTTCT GGCCCAGCCT
GTCATTTTGA TTTTACTTCT GACGAGTTTC ATCGCGACCT TTGCGTTCTC CATCTTTGAG
ACCACACTTT CGTTACTTAC GAAGCAACTG GGGTATTCCG ACCGGGGTAA CTTTTTTGTC
TTCGCAATTG TGGGGATCAC CCTCACGCTG GCTCAGGGAC TTCTCGTGAG AAGGCTGTTA
CCGCGTGTGG GCGAGGTTCG GATGGCGGTT GCTGGAATTG TTCTCATGGG CCTGGGCCTC
GCTGGAGTCG CTTTAAGTGG CCTGATCAGT CAACAGACAC TGCTCTGGAT TGCCATGCCG
GTCGCCGTGA TTGGGTTTGC TGCGACAACA CCTTCACTCC AATCGCTGCT TTCACTTTCC
GCCTCAAAAA CAGAGCAGGG TGGAACCTTG GGCTTGGGTC AAAGTGCCTC TGCCCTCGCT
CGCATTTGCG GGCCCTTTCT TGGCTTTCCT CTTATTGAAA TGAATATCTC TTCGCCTTAC
TTTGCTTCGA CGTTGCTCCT CACCTTGAGC CTGTTCATCT TCCTGCTGAT CGCCTCGCGC
TTACCTGACA GTACAGGCGA ACGCGGTGCT CATGCCGGTC ATTGA
|
|---|
| Protein sequence | MPTETLTDSP LDKKSSRSAL VLVFLTVFID LLGFGIVLPL LPRYAEHFQA TGLQLSMLSA
SFSAMQFLFS PLWGRLSDRI GRRPVLIFGL ASTAFFYLLF GLVTQWGVHG TILGLSPLMW
LFITRSGAGI SGATISTAQA YIADCTGKAE RGKGMALIGA AFGMGFTFGP LLGAMFVSSD
PQSTPTPLPA FAAASLSFMA FLAALFLLPE SLPAADRINH LETTEISPLS QRLTAVLAQP
VILILLLTSF IATFAFSIFE TTLSLLTKQL GYSDRGNFFV FAIVGITLTL AQGLLVRRLL
PRVGEVRMAV AGIVLMGLGL AGVALSGLIS QQTLLWIAMP VAVIGFAATT PSLQSLLSLS
ASKTEQGGTL GLGQSASALA RICGPFLGFP LIEMNISSPY FASTLLLTLS LFIFLLIASR
LPDSTGERGA HAGH
|
|---|
| |