Gene Plim_1943 details

Gene Information

• Locus tag: Plim_1943
• ID: 9138645
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2529739
• End bp: 2530521
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 58%
• Product: Radical SAM domain protein
• Protein accession: YP_003629972
• Protein GI: 296122194

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.228441
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGACTG ATCTTTCCAC TCTTCCTTCT GCTAAAAAAA CAGGCCACAG TTCTGCGCGC 
CTGCGTATTG CCGAAACCTT TCTTTCGGTG CAGGGGGAGG GTGCGCTGAC GGGCGTGAGA 
TCGTTTTTTA TCCGCACGAC GGGCTGCAAC CTGCGCTGCT GGTTTTGCGA TACTCCGTAC 
ACCTCGTGGA CAGCCGAAGG AAACTGGCAG ACCATTGATG AGTTGCTGGC TCAGGCCACT 
GCCAGTGGAG CGGAGCACGT CATTCTGACT GGAGGTGAAC CACTCCTTCA GCCCGCGATT 
GTCGAACTTA GCCACGCGCT GAAGGCTGCC GGGCTCCATA TCACTGTAGA AACAGCAGGA 
ACGGTCGACC GTCCCGTGAT GGCAGACCTG ATGTCGATCA GCCCGAAGCT GGCGAATTCG 
AACCCCACTG CCGCACCCGA TTTTCCTGTA AATCCCACTG CGGTGCGGGG AAGCCAAGGC 
GCGGTCGCCC GCAGACACTC TGAGCTGCGC TGGAACATCG CCACGCTCAC ACGTCTGACG 
ACTGACTACC CGTATCAGCT CAAATTTGTG ATCGATACTC CCGCTGATCT CGATGCACTT 
TCAGAGGCTC TTACTGAGTT GCCGCACGTT CCGCCGGAAC ATGTCTGGTT GATGCCCCAG 
GGGATCACAC AGGAAGAACT CGCCTTGCGT GGAGCCTGGC TCAAGCCACT GGCAGAATCG 
CAAGGCTACA ACTTCTGCCC CCGCCTCCAC ATCGAATGGT TCGGCCACCG CCGCGGCGTG 
TGA 

 

Protein sequence

MPTDLSTLPS AKKTGHSSAR LRIAETFLSV QGEGALTGVR SFFIRTTGCN LRCWFCDTPY 
TSWTAEGNWQ TIDELLAQAT ASGAEHVILT GGEPLLQPAI VELSHALKAA GLHITVETAG 
TVDRPVMADL MSISPKLANS NPTAAPDFPV NPTAVRGSQG AVARRHSELR WNIATLTRLT 
TDYPYQLKFV IDTPADLDAL SEALTELPHV PPEHVWLMPQ GITQEELALR GAWLKPLAES 
QGYNFCPRLH IEWFGHRRGV