| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1930 |
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| Symbol | |
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| ID | 9138632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2517423 |
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| End bp | 2518823 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | WD40-like protein repeat-like protein |
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| Protein accession | YP_003629959 |
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| Protein GI | 296122181 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00495857 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCGA AATGTTGTCA CTTCGAAGAA GGTTCTGCTG TGAAGTACGT CAAAACTGAT
CGTGGGCTCC TGTCATTTTT CTCGCAAGTT GGATCTTCCT GCATGGCAAA ACTCGGCTCT
CTGGCAAGTG TTGCCCTGCT GCTGAGCGGT GCTTCACTTG TTGCAGAAGA CTGGCCGAAT
TGGCGTGGGC CTCTCAATAA CGGAATCTCT TCCGAAAAAA ATATTGCGAC CACTTGGTCT
GCGGACAAGA ACGTCTTGTG GAAAACTCCC CTGCCAGGGC CAGCGGGTTC GACGCCTGTC
GTCTGGGGCC ATCAGATTTT CCTCACCACG GTCACCGAGA GTGGAGATCT TCAGGTCTTG
GGGCTGAGTA CCAAAGATGG TGCTGTGCAA TGGGTGAAGA CGGTATCCAA TAGCACTCTG
ACTGCACGCG GAGACGAAGG AAACGCAGCC TCTCCTTCTC CTGTGACTGA TGGCCAGCGT
GTCTGGGCAT TTTTTGGTGA TGGAACGCTG GCCTGCCTGA CTGTGGACGG CAAAGAAGTC
TGGAAGTTCA ATGTCCAGGA TCGATATGGG AAGTTCAACA TTCAATTTGG CATGAGTTCC
ACACCACTCT TACGAAATGG TGTGCTTTAC CTCCAACTGC TGCATGGTGA TGGGAATCCG
AAAACCCGTG AAGCACGCAT CGTGGCTATG GATGCACTGA CCGGCACAGA AAAATGGGCT
GTCGATCGAC CGAGCGATGG CAGCGATGAA AACGAACATT CTTATGCCTC TCCCGTATTT
TTTGGAGAAG GTGATGGAAC CGTGCTGGTG ACCCACGGAG CCGACTACAC CGTAGGGCAC
AGGCTGACCG ATGGGAGTGA AGTCTGGCGG ATGAGCGGAC TGAACCCCAC TGCGAAATAC
GATCGCACAC TTCGGTTTGT GGCATCACCC GTTGCTGCTG GGGATTTACT GGTCATTCCA
ACGGCAAAAC GAGGCCCGGT GATGGGCATT AAGCCCAAGC CCGGCAAAGA CCTGTTCAAA
ACCGAAGCCC ATCTGTGGCA ATGGGAAAGA ACACCTGATG TTCCTTCACC GCTGATTCTG
GATGGGCTGG TCTACCTGTG CATGCACGAC GGGAATCTCA ATGTGCTGGA AGCGGATACG
GGCAAAGAGG TCTACTTTGA GCGGACACAT CGGCAAAGAC ACCGGGCGTC GCCTGTGTAT
GCCGATGGCC ATATCTATCT CACGGCACGC GATGGCAAAG TGACCGTCGT AAAGACAGGT
CGGAAATTTG AAGTTGTTGC TGAAAACGAG ATCCCGGAAT CGATTTCGTC TTCACCAGTG
ATTTCGAACG GAACTCTTTA TCTGAGAACG TTTTCCAATC TTTACGCCAT TCGCGAATCG
AGCCGCAGCC CGTCAAAATG A
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| Protein sequence | MTPKCCHFEE GSAVKYVKTD RGLLSFFSQV GSSCMAKLGS LASVALLLSG ASLVAEDWPN
WRGPLNNGIS SEKNIATTWS ADKNVLWKTP LPGPAGSTPV VWGHQIFLTT VTESGDLQVL
GLSTKDGAVQ WVKTVSNSTL TARGDEGNAA SPSPVTDGQR VWAFFGDGTL ACLTVDGKEV
WKFNVQDRYG KFNIQFGMSS TPLLRNGVLY LQLLHGDGNP KTREARIVAM DALTGTEKWA
VDRPSDGSDE NEHSYASPVF FGEGDGTVLV THGADYTVGH RLTDGSEVWR MSGLNPTAKY
DRTLRFVASP VAAGDLLVIP TAKRGPVMGI KPKPGKDLFK TEAHLWQWER TPDVPSPLIL
DGLVYLCMHD GNLNVLEADT GKEVYFERTH RQRHRASPVY ADGHIYLTAR DGKVTVVKTG
RKFEVVAENE IPESISSSPV ISNGTLYLRT FSNLYAIRES SRSPSK
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