Gene Plim_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1922 
Symbol 
ID9138624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2510681 
End bp2511724 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content52% 
IMG OID 
ProductDipeptidyl aminopeptidase/acylaminoacyl- peptidase-like protein 
Protein accessionYP_003629951 
Protein GI296122173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000977803 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCGT TTGCCCGCAC AATTCTCTGG ATACTGGCTT TTGGTGGCTT ATGTGTTGTC 
GCGGGATCTT CTGCTCAGTG GTGGGAAAAG AACGTCCGGC TGGTGGGAGC TGAGGACTTA
GAACCACAAC GGTTTTTCTC TCTCGAAGTT TCTCCAACCA CTCCTCCATC TCTTCCTGCA
CAGAAACGAG TAACTGTCAC CTATTGCGAA AGATCCACGG GATCTCTTCT GGCCGATATT
CACGTTCCCA CTCGGCTACA GTGCCCTTCG ACAGGCTGGC CAGTGATCAT TTCATTTCAC
AGTGGCGGTT GGCGGAATGG TCATCGCGGG CATGCTCCAA TTTCAGAGCT TGTTGATCGC
GGTTTTGCTG TCGTATCACA CGACTTCCGC AGCTCGGATG TCGCGATTTT CCCGGCTCAG
CTTGAGGACA GCATCGCACT GTTAAAATGG CTGGAAGAAC ATGCCGGCGA ACACCAACTC
GATCATCAAC GGATTGCCTT ATTCGGTGCT TCCTCTGGTG GACATCTGGC TTTGCTCACC
GGTCTTTGCC CCGAAGTTTC GTCTCAGGTT CAGGCCGTTT GCTCACTTTA CGCACCGACC
GATTTTCAAT CCCTGGAATC TGGTGCAGGT TCTCAGGATG AAATGAATCA CTTTGCGTTA
TGGGCACCCG AATCTCTGCT GCTCGGCGGG CCAATTCCTG AACATCCGGC GGAAGCCCAG
TCAGCCAGTC CCTTGTGGCA AGCTGCACAG ATCAAAAAAT CGCCACCCAT TATGCTGATG
CACGGAGTGG ATGACGATCA GATTCCGTTT GAACAATCGC TGAGTTTGAG TCGGTTGCTG
CAGGAGAAGC ATCAACAGGT CACTTTATGG AAAATTCGAT CTTTGCCTCA TGGCACCTGG
CCGACCAGTC GCATCCAGTC AGGTGTCTTG AAGTTTTTCT CAAAGCATCT GGGAGTGACG
ACGAAGTTGG ATCAACAGCC ACAAATCGCC AGGTATCGTG CGATCATCAA TGAGCCAAGT
CTCCCCTACG TCCCCATACG CTAG
 
Protein sequence
MTAFARTILW ILAFGGLCVV AGSSAQWWEK NVRLVGAEDL EPQRFFSLEV SPTTPPSLPA 
QKRVTVTYCE RSTGSLLADI HVPTRLQCPS TGWPVIISFH SGGWRNGHRG HAPISELVDR
GFAVVSHDFR SSDVAIFPAQ LEDSIALLKW LEEHAGEHQL DHQRIALFGA SSGGHLALLT
GLCPEVSSQV QAVCSLYAPT DFQSLESGAG SQDEMNHFAL WAPESLLLGG PIPEHPAEAQ
SASPLWQAAQ IKKSPPIMLM HGVDDDQIPF EQSLSLSRLL QEKHQQVTLW KIRSLPHGTW
PTSRIQSGVL KFFSKHLGVT TKLDQQPQIA RYRAIINEPS LPYVPIR