| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1918 |
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| Symbol | |
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| ID | 9138620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2503019 |
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| End bp | 2504347 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003629947 |
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| Protein GI | 296122169 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.250738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACCTG CCACTTTCAA TCCCCCACGT AGCCGCAGCG GTTTATCCTC GGAGCAGGAT
TTTGAAGCAC TCAAGCGATT AATCCACGGC AAACTCGTGG AAAAACTCGA TCTCTCCCGC
CTGGGAGACC TGGAAGGTGA TACTCTTCGC CGAGAAATCC GCCTGGTTGT CGAGCACTTA
TGCGACACCG AGAACCCCTT GCTCAATCGT TCCGAACGTG AACGGCTGAT CGAAGAAGTT
CTTGATGAAA CCTTTGGCTT TGGTCCGCTG GAGATTCTTC TCAAAGAACC CGGCGTCGCT
GACATCATGA TCAACGGCCC AAAGAATGTC TTCATCGAAA AAGGTGGACG GATTCAAAAG
TCGGAAGTCA CCTTCCGCGA TAACGATCAT CTTCTGCAGA TTCTCGATCG CATCGTCTCC
CGCGTGGGGC GTCGTGTGGA TGAAACCTGC CCGATGGTCG ATGCCCGTCT TCCAGATGGC
TCGCGACTCA ACGCTGTCAT TCCTCCACTG GCCCTGGATG GCCCCTCGCT CACAATTCGT
CGATTTGGTT CCAAGCCACT GGCTCTGGAA GACCTGCTGA AATTCGGTGC CTTCACACCC
GAGATGGTCA TGCTTTTAGA AGGAGCCATG AAGGCTCGTC TTAACTGCAT CATCAGTGGA
GGTACGGGTT CTGGTAAAAC CACACTTCTT AATACTTTGT CGAGCTTCAT TCCGAATGAT
CAGCGTGTCA TCACGATTGA AGACGCTGCC GAAATTCAGC TTCAACAGGA ACATGTGCTG
AGGCTTGAAA CACGTCCTGC CAATATCGAA GGTAAGGGAC GAATCACAGC GACTGATCTT
GTGAAAAACG CACTGCGTAT GCGGCCCGAC CGAGTGATTA TTGGGGAATG CCGTGGAGCC
GAAGCTCTCG ACATGCTCCA GGCCATGAAT ACTGGTCACG AAGGGTCACT CACCACGATC
CACGCCAATA CACCGCGCGA TGCTGTCTCG CGACTGGAAA CGATGATCGC GATGGGTGGT
GTTGAAATTC CTCTGCGAGC ACTCCGCCAG CAGTTTGCAG CGGCAGTCGA TCTGATTATT
CAGACGAATC GTCTACAGGG TGGGCCACGC AAAATTACAC ATATTACAGA AGTGCTCAAC
ATGGAGCAGG ACACCGTGGT GATGCAGGAC ATTTTCGTCT TCGTGCAGGA TGGAATTGAT
GAGACTGGTC GAGCTTTTGG CCACTTTGAG TCCACGGGAG TCAGGCCATC GTTTATGTCT
CGACTGGAGC AGGCTGGTAT TCGTTTGCCA GCGAACATTT TTCATCAAAG AGCACTGGGT
GGGCGGTAA
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| Protein sequence | MPPATFNPPR SRSGLSSEQD FEALKRLIHG KLVEKLDLSR LGDLEGDTLR REIRLVVEHL
CDTENPLLNR SERERLIEEV LDETFGFGPL EILLKEPGVA DIMINGPKNV FIEKGGRIQK
SEVTFRDNDH LLQILDRIVS RVGRRVDETC PMVDARLPDG SRLNAVIPPL ALDGPSLTIR
RFGSKPLALE DLLKFGAFTP EMVMLLEGAM KARLNCIISG GTGSGKTTLL NTLSSFIPND
QRVITIEDAA EIQLQQEHVL RLETRPANIE GKGRITATDL VKNALRMRPD RVIIGECRGA
EALDMLQAMN TGHEGSLTTI HANTPRDAVS RLETMIAMGG VEIPLRALRQ QFAAAVDLII
QTNRLQGGPR KITHITEVLN MEQDTVVMQD IFVFVQDGID ETGRAFGHFE STGVRPSFMS
RLEQAGIRLP ANIFHQRALG GR
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