| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1907 |
|---|
| Symbol | |
|---|
| ID | 9138609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2488214 |
|---|
| End bp | 2488726 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | CheW domain protein |
|---|
| Protein accession | YP_003629936 |
|---|
| Protein GI | 296122158 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.96206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCTC CAGTTGATGG AACTCCCACC GTTGAATCGC ACGCCTTGAA TCAGAAGCAG
TTCGTCACCT TCTGGGTGAA CGAACAACTC ATGGGCATTC CCGTCGGTAT TGTGCAGGAG
GTTCTGAACC CCCAGACAAT CGCTTCCGTT CCGCTGGCAC CACGAGAAAT AGCCGGGCTG
TTGAATCTCC GCGGCCAGAT TGTCACCGCC ATCAACCTGA GGCGGCGTCT GGGATTGCCT
GATTATTCGC AATCGGAGGG AAGCATGAAT GTGGTGCTCC GCTACCGGGG CGAATCCTTC
AGTCTGCTGG TCGACAGCGT GGGCGATGTG CTGGATATCG CCGAGATGCC TATTGAAGCT
CCACCTCGCA CGATTTCATC CACCTGGAAG GCCTATACCG AAGGTGTGAT CCGCCTGGAA
AAGAACCTCC TGCTATTGCT CAACGTGACG GCCATTCTGG CAATTGGCGG GCCGCTGAAA
TCGGAACATC CACCGATGGA ATCGCGACCA TAA
|
|---|
| Protein sequence | MIAPVDGTPT VESHALNQKQ FVTFWVNEQL MGIPVGIVQE VLNPQTIASV PLAPREIAGL
LNLRGQIVTA INLRRRLGLP DYSQSEGSMN VVLRYRGESF SLLVDSVGDV LDIAEMPIEA
PPRTISSTWK AYTEGVIRLE KNLLLLLNVT AILAIGGPLK SEHPPMESRP
|
|---|
| |