| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1897 |
|---|
| Symbol | |
|---|
| ID | 9138599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2475081 |
|---|
| End bp | 2476313 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003629926 |
|---|
| Protein GI | 296122148 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0747984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGATC ACTGGGATAT CTTCTGTCGG GTGATTGACA ATTATGGTGA TATTGGTGTG
TGCTGGCGTT TGGCTCGGCA GTTGCATCAT GAACTGGGAA TTCGCGTCCG GCTCTGGATC
GATCAACTCG ATGTGTTGAC TCACCTGTGC CCACAAGTCC GAATGAACCT CGGCTGTCAG
CAGGTGGATG GTATCGAAAT CTGTCAATGG GAGACTTGTT CAGAAGAGAC TCAGCCCGCT
CGAGTGGTCA TTGAAGCTTT TGCCTGTGAG ATTCCCGGCT GTTACCAAAG ATCACTCCTG
TCACTGCATG AGTCACAGCC AAATCCTCCA GTGGTATGGA TCAATCTGGA ATATCTCAGT
GCCGAGAATT GGGTTTCTGA ATGCCATGGG CTGGCGACTC CGGGTTCTTC GACCAGCCTG
AGGAAGCATT TCTTCTTCCC GGGTTTCACG ACAGAAACGG GGGGGCTGCT TAAGGAAGCT
GGTCTCAGGG GGCAGGTTCG TCGCTACCAG CAGAAGTTCA CATCTCAAAG TTCTCAGGCG
ACGCCAGACC TGTGGGCTCG ACTAGTTGGG AAAACGGGGG AAAACCAACT TCCTGACTCT
CAGAAAATGC CCGGTGAACT GCGAGTTTCT TTATTCTGTT ATCAGAATCC GTGGATTCCC
AGACTTCTCG ATTACTGGTC ATCCCGAAGT GCTCCCACGA GTTTGTTTGT CACCCACGGG
TTAGCGACCA ATCAGGTTGC CAAATGGTGT GGCTATTCAC TCAAAGCGGG CGATCGACGG
CAAATTGGTG CTCTTGAGCT TTTGATTTTG CCCTTTCTGC CACCCCCGGC TTACGACGAA
CTGCTTTGGA GCTGTGATTT CAATTTTGTG CGGGGGGAAG ACTCTTTTGT TCGTGCTCAA
TGGGCGAATC GACCTCTGAT CTGGCAGATT TATCCGCAGG AAGATGCTGC TCACCATAAG
AAGCTCGAAG CCTTTCTGAG CCTGTATTTG AGGGGTTTTT CCAATGTTGA GGCAGTTTCT
GAGTTCTGGC GTCTTTGGAA TCACATTCCG CCGGATCGTT CCTGGGCACA TACCAGCGGC
ATCGAAGACG CCTGGGAAAA ACTGCTTCAT TTTCGACAAG AATGGAATCG ACACAGCGAG
GAATGGGCCG ACCGGCTTGA CCGTAAGAGC AATCTCGCAA ACAATCTGGA AATGTTCGTA
AGAAAAATCC GTGAGGAAAC TTCAAGCTCT TGA
|
|---|
| Protein sequence | MADHWDIFCR VIDNYGDIGV CWRLARQLHH ELGIRVRLWI DQLDVLTHLC PQVRMNLGCQ
QVDGIEICQW ETCSEETQPA RVVIEAFACE IPGCYQRSLL SLHESQPNPP VVWINLEYLS
AENWVSECHG LATPGSSTSL RKHFFFPGFT TETGGLLKEA GLRGQVRRYQ QKFTSQSSQA
TPDLWARLVG KTGENQLPDS QKMPGELRVS LFCYQNPWIP RLLDYWSSRS APTSLFVTHG
LATNQVAKWC GYSLKAGDRR QIGALELLIL PFLPPPAYDE LLWSCDFNFV RGEDSFVRAQ
WANRPLIWQI YPQEDAAHHK KLEAFLSLYL RGFSNVEAVS EFWRLWNHIP PDRSWAHTSG
IEDAWEKLLH FRQEWNRHSE EWADRLDRKS NLANNLEMFV RKIREETSSS
|
|---|
| |