| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1890 |
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| Symbol | |
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| ID | 9138592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2468054 |
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| End bp | 2470822 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | protein of unknown function DUF1549 |
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| Protein accession | YP_003629919 |
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| Protein GI | 296122141 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTT TTACGAAATG CCTGACGGTC CTGGCTGTGG GGATGGCCGC ATCTGGTGAG
CACCTTCAAG CGCAGGTCAA GACACCCGCA ACTGCCGAAG AGTCCAGGCA GGTCGTCTCA
GCGCAAAACT CGCTGAACAC TCGATCTGTT GTGGTTTCAG GATCTCTACA AGATTCACAG
CTTCCAGCCG ATTTTGAATT CTTTGAGAAG AAGGTTCGGC CAATCCTCGT GGCGCATTGT
TACACATGTC ATTCCGCTGA CAACAAAGCT GCTGGTGGTT TGCGCGTCGA TGATTATCAG
GGATTGCGTA ACGGTGGTAA TCGAGGTTCT GCAGTTGTTC CACATCAGCC TGAAGAAAGC
CTGTTAGTTC AGGCTGTTCG ATACACTGGC AAGCTGAAGA TGCCTCCTGA AGAAAAACTG
CCTGACGAGA AGATCCAGAT TCTTGAAGAC TGGATTCGTC GCGGTGCTCC CTGGCCTCGT
GTGGAAGTTT CACATGAGAT CGGCAAAGGG AGTAGTGATT ATCAGGAGCT TTTGGCCAGC
CATTGGGCTT GGCAGCCATT GAAAGCTGTG ACCCCACCTG TCATACAAGA TTCGAACTGG
GCCACTGACC CCATTGATCA GTTTGTGCTG GCAAAGTTGA ATGATCACAA CCTTTCCCCT
GTGAGTGATG CTGACCCTGC CTCCCTATTG AGGCGAGTCG CCTTTGATCT CACGGGATTA
CCTCCCGGCG ACGAGCAATT GCGAGCTTTT GAAGCAAACC CATCGACTGA AAATTATGCT
CAACTTGTCG ACGGATTTCT CGCTTCTCCT GCATTTGGAG AGAAATGGGG TCGCCACTGG
CTGGATGTCA GTCGTTTTGG CGAGTCCACA GGGTCTGCTC GTAATATTCC CTACCCTCAA
GCCTACAAGT ATCGTAACTA CGTTATTGAT GCGTTTAATA AAGATAAGCC CTTTGATCGA
TTTATCGCTG AACAGGTCGC GGGTGACCTG CTCCCCTACT CTTCCGAAAG TGAACGCATC
GAAAACCTTG TGGCTACGGG CTTCCTGGCA CTGGGTGTCA AAGATGTAAA CCAGAGGTTT
AAGGTTCGTT TCGTCATGGA CAATGTTGAC GAAGCGATTG ACACCGTGAC CCGTTCAGTC
CTGGGAGTCA CTGTCAGTTG TGCACGTTGC CATGATCATA AATTTGATCC GGTTTCGCAG
CGTGAGTACT ACGCACTGGC AGGAATTTTC ACGAGTACTG ATATTCTGGC TGGTGTCCGA
AATAAGATGG GTGGTGGAGG TCTGGATTAT TACGACACTG CGGCATTGCT GGTGATTTCA
CAAACCAAAT CTGAACCTGA TCCTGAGCAG CATCAAAAAG TTGAGAAAGC TCAGCAGGCA
GTTGCCGAAG CGCGTGAGGA ATTTGAAAGA CTCCGTGGGA CACCCGAAGG CCAGGAGAAA
GGCCCGAATG GCCGTCCCAG GCAGCAGATG GCTCGCCAGA AATGGAACCG TCTTCAAGCC
GAGTTAAACC TCCTCACTGA TCCAGCTCAT TTAGGCGAAG TGACTCTTGG TGCCCGTGAC
AGTAAGCAGA TTTCAGACAC AGAACTTCGC CTGCGGGGAG AGGCTGAGCA ACTCGGGCCG
GTTGTCCCCC GTGGATTCTT GAAACTGGCG ACTTGGGAAG GTCAGCCACA GATTACCGCT
GGGCAAAGTG GCCGGGCCGA GCTCGCTCAA TGGTTAACTG CACCGCAGAA TGCCATTACT
CACCGGGTGA TAGTGAATCG TGTCTGGCAT CATCTATTTG GTCGAGGAAT CGTCTCGACA
GTCGATAACT TCGGTCTGAC GGGTGATACC CCCTCTCATC CGGAACTCCT CGATTTTCTC
GCTCAGGATT TCATTCAAAA TGGAGCCTCG CTGAAGAAAC TGATCCGCAA GATTGTTCTC
ACAAAAACCT ATCGACTCAG TACGGAAAAT GTCGCTGCAT ATCAGCAGAT CGACCCTGCG
AATCGCTGGA TCTGGAGGCA CACTCCTCGC CGCCTGACTG CCGAGGAGAT TCGCGACAGT
ATTCTGGCCA CAACTCAGTC TCTTGATACT TCTCGTCCCG AGAGGTCTCC CGCTGCTGAG
TTGAAGGTGA TCGAAATTCG GAACAACGGC CCGGAGGCCC GCAATCTTCA AGTGGCGGCC
GAGAACTCAA CTCTCCGCAG TGTTTATCTT CCACTCGTCA GGGGGATTCT CCCCAGAGCG
TTAGAAGTGT TTGACTTTGC TGAGCAAGGG ATGGTGACTG GCGCCCGAGA CCAAACAACT
GTTGCTACCC AGTCGCTCTA CCTCCTGAAC GACCCTTTTG TGCGGCAACA CAGTGTTCGG
CTGGCACAAT CCTTGCTTGA TGGTGAAGAT CACGACGATC GATCCCGCAT CGTTCATGCG
TATCGCCAGA TTCTTGGACG AGATCCCTCG GTAACTGAAG TTAACACAAT CGTTGACTAT
TTATCTGTGT ATGAGAAAGA AGCCAGTATC TATCTGGCAT CAAACACTGC TGGGTCATCT
GAATCGCTTT CAACAAATCG ATTGATTGCG GCTGCCTCCA GTAAGCCTGA AGAGACGTCG
GCTGCTTCGG GAAACAATCC TTCTGGGGCT ACAAATAGTG CGTTGGCACT CGCGAATGCC
GATGAGATGG AGCAAAACGA TCTTCCGGTT GCCCTGAAGA AGATCTCGAT TCGAGATTCC
CGGACCGCAG CCTGGGGTTC ATTCATTCAG GCTCTCTATG CCTCGGGTGA TTTTCGTTAT
CTCAAATAG
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| Protein sequence | MSFFTKCLTV LAVGMAASGE HLQAQVKTPA TAEESRQVVS AQNSLNTRSV VVSGSLQDSQ
LPADFEFFEK KVRPILVAHC YTCHSADNKA AGGLRVDDYQ GLRNGGNRGS AVVPHQPEES
LLVQAVRYTG KLKMPPEEKL PDEKIQILED WIRRGAPWPR VEVSHEIGKG SSDYQELLAS
HWAWQPLKAV TPPVIQDSNW ATDPIDQFVL AKLNDHNLSP VSDADPASLL RRVAFDLTGL
PPGDEQLRAF EANPSTENYA QLVDGFLASP AFGEKWGRHW LDVSRFGEST GSARNIPYPQ
AYKYRNYVID AFNKDKPFDR FIAEQVAGDL LPYSSESERI ENLVATGFLA LGVKDVNQRF
KVRFVMDNVD EAIDTVTRSV LGVTVSCARC HDHKFDPVSQ REYYALAGIF TSTDILAGVR
NKMGGGGLDY YDTAALLVIS QTKSEPDPEQ HQKVEKAQQA VAEAREEFER LRGTPEGQEK
GPNGRPRQQM ARQKWNRLQA ELNLLTDPAH LGEVTLGARD SKQISDTELR LRGEAEQLGP
VVPRGFLKLA TWEGQPQITA GQSGRAELAQ WLTAPQNAIT HRVIVNRVWH HLFGRGIVST
VDNFGLTGDT PSHPELLDFL AQDFIQNGAS LKKLIRKIVL TKTYRLSTEN VAAYQQIDPA
NRWIWRHTPR RLTAEEIRDS ILATTQSLDT SRPERSPAAE LKVIEIRNNG PEARNLQVAA
ENSTLRSVYL PLVRGILPRA LEVFDFAEQG MVTGARDQTT VATQSLYLLN DPFVRQHSVR
LAQSLLDGED HDDRSRIVHA YRQILGRDPS VTEVNTIVDY LSVYEKEASI YLASNTAGSS
ESLSTNRLIA AASSKPEETS AASGNNPSGA TNSALALANA DEMEQNDLPV ALKKISIRDS
RTAAWGSFIQ ALYASGDFRY LK
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