| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1858 |
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| Symbol | |
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| ID | 9138559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2428459 |
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| End bp | 2429439 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003629887 |
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| Protein GI | 296122109 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATC CTGATGCCGA GACTGCAAAA GGGTGTCGTG TTCTCCTCAA AAGTCAGCAA
AGAGATCACA CAGCTTCTGC CAGAACTGTA TGCTTCCTGG TGATGGCCAG TCTTTCTGCT
GCGTTTCTTG GAAATGGCTG TACAACGACT CCCGGACAGG CTGCTTCCAG CATCTGGCCG
ACGACATCAC GTTCAACCGA CAACGATCCT GTGAAGCTGC GCGATCCCGT GCGCATGCAT
GTGGCTTACG GGCAGTGGAA TGAGCGATCT GGCAACAGCA AGGAGGCGCG GGCCTCCTAT
GACGAAGCCA TCGAAAAAAA TCCCAAGTCA GTGGATGCCC TGCTCGGGCT GGCAAGGTTA
GACATTCTCG GCGGTCGCCA TGCGGATGCT GAGACCTTGA TTGCGAAAGC GGCCAAGCAA
GCTCCACAGA ATGCACAGGT GCGTGCCACT CGCGGGCAAC TGTTCGAATC CAGGGGTGAG
TGGGCACTCG CCATCGAAGA GTATCGAGCA GCGGTGAAAC TGGCACCGGA AGAGACGAAC
CACCGGTTTC AGTTAGGTAC GGCTCTGGCC AAAAGTGGGG ATTATGAAGC GGGTCTGGCT
GAACTGACCC GTGTTCAAGG GGCTGCGATC GCGCACTACA ATGTGGGCTA TATTCTTCAC
GAGAAAGGCG AACGTGGTGC CGCAGAGCGT TACTTTGCCA AGGCTTTGCA GTTCAATCCC
GAATTGAAAC CGGCTGGAAC GATTCTCGCA CAGTATCGTG AGGCTCGTGG ACAGATCTCT
GCCGACGCAC TGGCTCGAAT GGAAAACCCG GAAAGTGGCG TACGACAGGT TTCAGGCTTA
GTGAAGCCAG AAGATGCCAA TCGCGTGACG GGTGATTTCA AAGCTGAGAG TGCCGTCTAT
CGATCGGAAT CGATGGCGCC ACCCTCGAAC CTGACCGATG CGCAGCGTGA ACAGTGGATG
AATCAGCAGG TACAGCCCTG A
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| Protein sequence | MSNPDAETAK GCRVLLKSQQ RDHTASARTV CFLVMASLSA AFLGNGCTTT PGQAASSIWP
TTSRSTDNDP VKLRDPVRMH VAYGQWNERS GNSKEARASY DEAIEKNPKS VDALLGLARL
DILGGRHADA ETLIAKAAKQ APQNAQVRAT RGQLFESRGE WALAIEEYRA AVKLAPEETN
HRFQLGTALA KSGDYEAGLA ELTRVQGAAI AHYNVGYILH EKGERGAAER YFAKALQFNP
ELKPAGTILA QYREARGQIS ADALARMENP ESGVRQVSGL VKPEDANRVT GDFKAESAVY
RSESMAPPSN LTDAQREQWM NQQVQP
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