Gene Plim_1844 details

Gene Information

• Locus tag: Plim_1844
• ID: 9138545
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 2411910
• End bp: 2413907
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 54%
• Product: AAA ATPase central domain protein
• Protein accession: YP_003629873
• Protein GI: 296122095

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAACT TTTCTGCCGA TCTCGTGGGG CGTATTCGAG CTGGCTATCC GCTGGTCGTG 
ATCAAGACAC ACGAAGAGGA ACGCTGCCTA TCAATCATTC GCCAACTCTC GGAAGAAGAA 
TCCTGGGAAT TGCGTGAGGG AATGCCGGCT GAACATCAGC CCGATCTTGC CGCCACGAGG 
CCCATCGATT CGGCTCAATG GGTTGCCGGC GCCGAGGTCG CTGCGGAAGG TCTGGTCTGG 
CTCATTTGTC GGTTAGGCCG CTTTCTCGAT TCTCCGCAGG CCATTCGAGA TTTTCGTGAA 
ACCGTCACCA CGGCACTTCG TCGCCGTCAA ACTTTGATCG TTATTGATCC TGACCCAGAT 
CTTCCCGTGG ATGTCGAAAA GCTGGCTATT TCAATGGCCC TCCCTTTGCC TGATCTCGCC 
GATTTGAGAC AGATTTTGCA GGAGTACAAG GAAGAATCTC TTGCGATGCA TCACCAGGTC 
GAACCTTGGA GCCACGAAGA GGAAGACTCA TTGCTTAAAG CACTCGCCGG TCTGACCTGG 
CATGAAGCTC GCATGGCAAT TCGCCGGGCG ATGCTTGATC GCAAAACCGT TGATGATGAT 
GTCATTCGTC TGCTGATCTC CGAGAAGAAG AGCCTTGCTT CCGGATCGGA GTTCTTGACC 
TTTTATGATC TTCAAGAAGG TCTAAACAAT GTTGGTGGAC TCGATCAGCT CAAGGAGTGG 
CTGACCCAAA GATCAAAGGC TTTATCACCC TCAGCCCGAG AACAAGGGAT CCCTGCCCCA 
AAGGGAGTCT TTCTCCTGGG GGTTCAAGGG TGCGGAAAAA GTCTTTCTGC ACGCGTGACT 
GCCAGAGTCC TGGGGTTTCC TCTGGTGCGG CTCGATGTCA CTCATTTACT GGCTGGTCAG 
CACGGTGGGC CGGAAGAAAA TCTGCGAAAA GTCCTGCAGA CGATGGAGAA TCTCGCACCG 
GCTGTCCTCT GGCTCGATGA AATCGAAAAA GGTTTTGCAG GAGCCGAACA ATCATCCGGT 
GGAGCGACCG ACTCAACCAT GGCCCGCCTG CTGGGAACTT TTCTGACCTG GATCAGCGAA 
GTCGAGCAAC CTGTCTTTCT GGTAGCCACA GCCAATTCTG TTGAATCTCT TCCCCCGGAG 
CTGCTGCGCC GCGGCCGATT TGATGAACTC TTTTTTATCG ACTTACCCAA CTTTGATGAG 
CGACTAAAGA TATTGCAGAT CCATCTCGAA AAGCGAGGCT GGCAACCTTC CCTGTACGAT 
CTCGATCTGT TGGCGCGGCA GACCGATGGC TACAGCGGAG CGGAACTGGA GCAGATTGTC 
AGTTCAGCGA TTGTGGAATC TTTCAGCCAC GGTCGAATTC TGGAAATGGA AGATCTTGAG 
AAAGCACGTC GATCACTGAT TCCCTTGTCG ATCACTGCCG AAGATCAGGT TTTTGCGATC 
CGCCAGTGGG CGGAAGGTCG TTGCCGCAAA GCGACCAGCG ATCATCGGGT TGTCCGCATG 
CTCGACGATG AACAGCAGGC AGAATTACGC ACGATTTCCG CAGCTCCCGC AGTGACCATA 
GATGCTGCAG AGGCATGGCA ACAACTGGCA GCTCACGGCC AACTGAAGGC TGCAATTGTC 
GAATATGTCA GACGAACCGG TGAGGCGGGC TTTGCCCCTC TGGCCGAAAG TTTTGATCGA 
TTTCAACCCA CGAAAGGTGA CTACGGTTTA CGGCTGAAGC ACCCGGCTGG CGTCCTTGTC 
GCGGCCGGAT TGTCTCGTGA GTTTGCCAAT CTTCTGATTG AGTTGTTCTC GTCGAGAAGG 
CTCTACTTAA GAGTCGTTCC TCCCGCGCAT GAACTGGTGC AAGTCCCATT AAGGCTCGCT 
CTTCTGGATG CTGTTCCCTC GGAAGCGCTG GCGAAACCGG TCTTTCTTCC CTGCACGTTA 
CGACTTTCGC CGGATGTTCG TAACGCTAGA TCTCTACAGG AGTTAAAAAT CGTCAGGCTG 
GGCACTCAAG CTGAATAA 

 

Protein sequence

MSNFSADLVG RIRAGYPLVV IKTHEEERCL SIIRQLSEEE SWELREGMPA EHQPDLAATR 
PIDSAQWVAG AEVAAEGLVW LICRLGRFLD SPQAIRDFRE TVTTALRRRQ TLIVIDPDPD 
LPVDVEKLAI SMALPLPDLA DLRQILQEYK EESLAMHHQV EPWSHEEEDS LLKALAGLTW 
HEARMAIRRA MLDRKTVDDD VIRLLISEKK SLASGSEFLT FYDLQEGLNN VGGLDQLKEW 
LTQRSKALSP SAREQGIPAP KGVFLLGVQG CGKSLSARVT ARVLGFPLVR LDVTHLLAGQ 
HGGPEENLRK VLQTMENLAP AVLWLDEIEK GFAGAEQSSG GATDSTMARL LGTFLTWISE 
VEQPVFLVAT ANSVESLPPE LLRRGRFDEL FFIDLPNFDE RLKILQIHLE KRGWQPSLYD 
LDLLARQTDG YSGAELEQIV SSAIVESFSH GRILEMEDLE KARRSLIPLS ITAEDQVFAI 
RQWAEGRCRK ATSDHRVVRM LDDEQQAELR TISAAPAVTI DAAEAWQQLA AHGQLKAAIV 
EYVRRTGEAG FAPLAESFDR FQPTKGDYGL RLKHPAGVLV AAGLSREFAN LLIELFSSRR 
LYLRVVPPAH ELVQVPLRLA LLDAVPSEAL AKPVFLPCTL RLSPDVRNAR SLQELKIVRL 
GTQAE