Gene Plim_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1843 
Symbol 
ID9138544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2410499 
End bp2411776 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629872 
Protein GI296122094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGCG CTGCAGCCGG AACAGTGAGG GCGGAATCAT CTGCTTCACC CCCTGAGACT 
CCTTCGGCAG TCACGTCAAT TCCCAAAGCT GATGGTCACA CCCAGCGAAA TAAACGACGC
ATTCACGAAA CCGATTTCCG CATGGAAATC GTTACCGATC ATGCCCGCCT GCAAGAAATC
ATTCCACAGT GGAGTGAATT AGCCAGTCGG TCGATCGAGC CCAATCCTTT TTATGAGCAT
TGGTTTGTCC TGCCGGCGCT GCGACATTTT CCGCACGATC CGGGACTTCG CTTTATTCTC
ATCTGGCAAT CGGGATTGCG GCCCGGAGAA TCCGAAAAGC TGGTCGCGAT GTTCCCTCTC
CAGCGTCAGC ACAAGACATG GCAACAGCCG CTGAATTGTG ATCGACTCTG GCAGCATGAT
TACACGTATC TTTGCACTCC CCTGGTTGAT TCTGAGAACA CAGCGATCAT TCTGACCGAG
TTCTTCAAGT GGACTCGGAC AACAGCCTGC GGTGCCAGTT TTCTCGAGTT GCCGCATATC
CATGGTGAGG GGCCATTTCA ACACGCTTTA CTCGAAGCCA TGGAGCGACA ATCGGTCTTT
TCGCTCGTAT CTCATCAATA TGGCCGGGCG CTGTTTCGAA GAGCCGCCAG TGCTGAGATT
TATCTGGATC AGGCGACGAC ATCGCATCAC CGTCAGGAAC TCCGGCGGCA ACGTCGTCGG
CTTGCTGAAC AGGGGCAATT TGAAACGCGT GAATTGAATG CCGGGGAGAA TGTTGACCCC
TGGGTGGATC TTTTTTTGCA GCTTGAAGGT GGAGGATGGA AAGGTCAGCA ACAGACGGCG
ATGGCATCGC TCTCTCACCA CGCACAGTGG TTTCGTGATG TCTGCCGGGC AGCTCAGGAA
CGCGGACAAT TGATGATGCT GGGGCTGTTT CTCAATGGTC AGGCGATCGC TGTCAAATGC
AATTTTCTGG CGGGAGATGG TGGCTTTACA TTCAAGATTG GATTTGACGA AGCCTATGCC
AAATTCTCTC CCGGGGTACA ACTCGAAATT GAGAACATTG GCTTTGCTCA CCAGAAGCCT
GACTTGAATT GGCTGGATTC CTGTGCTGCT CCTGGCCACT TCATGATTTC GCGGCTCTGG
CCCGAGCGAC GAACGATTCA GCGACTACTC GTCTCGACGG GACGCTGGGG TGATCTTTCA
ATTGCCGCTC GCTTTGGATT GCGTGCCTTG CGAAGGGTCA TTAAGCCTCC ACAACAAACC
GCAATGGCCG ACAATTAG
 
Protein sequence
MGSAAAGTVR AESSASPPET PSAVTSIPKA DGHTQRNKRR IHETDFRMEI VTDHARLQEI 
IPQWSELASR SIEPNPFYEH WFVLPALRHF PHDPGLRFIL IWQSGLRPGE SEKLVAMFPL
QRQHKTWQQP LNCDRLWQHD YTYLCTPLVD SENTAIILTE FFKWTRTTAC GASFLELPHI
HGEGPFQHAL LEAMERQSVF SLVSHQYGRA LFRRAASAEI YLDQATTSHH RQELRRQRRR
LAEQGQFETR ELNAGENVDP WVDLFLQLEG GGWKGQQQTA MASLSHHAQW FRDVCRAAQE
RGQLMMLGLF LNGQAIAVKC NFLAGDGGFT FKIGFDEAYA KFSPGVQLEI ENIGFAHQKP
DLNWLDSCAA PGHFMISRLW PERRTIQRLL VSTGRWGDLS IAARFGLRAL RRVIKPPQQT
AMADN