| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1834 |
|---|
| Symbol | |
|---|
| ID | 9138535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 2396222 |
|---|
| End bp | 2397673 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_003629863 |
|---|
| Protein GI | 296122085 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.111433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATC AATCTGCAAA AATAGTTGCG CACAAATCAA AGCTCGATTT TTCCTGGGTG
ATCGGTGGTT TGGCAGCAGT TGCCTTTTAC CTTGTTTTAC CATCGATCCC CCTCGATGAG
AATTTTAAGT ATCGCTACTT CAATTCTCAC TGGATTGAAC ATTGTACTGT AGCGCTATTT
TTTATTGGCC TGGCGATTCT CGGGCGAAAA TTACTCAACT GGCCCTCCGA ACGGGGAGTC
TTGTCAGAAA ATATTCTGGA TGGGATTAAA TTTGACCCTC AATCAGATTC ATCTGTGGTG
GCTCAGCTCC TGCGAGAACA CATCCAACTG ACCGGCCGAC GATATCAGTC GACCGAACTT
TTTCGCCGCA TTGAGACTGT TTGCGGCTAT GTGATTTCCA GGCACACTGC CGCTGATCTC
GAATCACACC TGAGTTATCT GGCAGATACG GCGATCGCTC GACTGCATAG CAGTTACGCC
GCACTACGCA CAATTACCTG GGCAATTCCG ATTCTGGGCT TTCTGGGGAC AGTTATTGGG
ATCACAATGG CCATTGCCAA CGTGACCCCC GAGCAACTGG AGAGTTCACT CAACGAAGTC
ACTTCAGGTC TGGCAGTTGC TTTTGATACG ACCGCTCTCT CTCTGGCTCT GTCGATGATT
CTGGTCTTTG CCACGTTTGC GATCGAGCGG GGTGAATCGA ATGTCCTTGA TCAGATTGAG
GACTTTACCG TCCATCGCCT GCTCGGATTC TTCCCAGCCG AAAAGTCTTC CGAAGTCTCA
CCTCTGCTGG CTGCTGAACA CGATGTGGCC CGCCGCTTCC TGGATCAGGC CGATGTCTTG
ACCCGTCAGC ATCTGGAAGC CTGGAACAAT ACTGTCGCGA CATGTCGTGA ACAGTGGGCC
TTGCTGGCTA CCGAACAGGG GCACAGTCTG GCTGGTGCTT TAAGTGCTGC CATGCATGAA
GCTCTTTCGA CTCAGCAGCA ACTCCTGCAG CAGACTCAGG CCGAATCCCG GCGTGAAGTC
GAGGCCCTAC AGGCTTCATT TGCAGAAAAC CTATGCCTGA TGCAGCAGCA ACTGGCAGAA
TCGGTCCGCA GCCAATTGGA GTTGATGCAT CAGTCCTGGA AGTCGGCCAG CGAGGCTCAA
TCGAGCATCC AACATCAATT TACCTCCGCG CTGGCCGGAG CGATCGATGC CGTCCAACAG
AATGTCAGTA CTTTGGCTGG ATCTCTTCAG GATGTCAGCA CTCACTCATT AGCGCAGGCT
GAAGCGCTCG AGCGACAGAC AATTCAGATC AGCAGTCTTG TTGGTAGCAG CCAGCAATTG
ATTCAGGCGG AAAGTCTGCT CGCTGAGAAT CTGGCCACGC TGAGGCAGAC GCAAACGCTT
GAGGAAACGT TACTCAATCT GAATGCGGCA GTTCACCTGC TCTCAGCAAG GGCACATCAC
CGCGCTGCGT GA
|
|---|
| Protein sequence | MQNQSAKIVA HKSKLDFSWV IGGLAAVAFY LVLPSIPLDE NFKYRYFNSH WIEHCTVALF
FIGLAILGRK LLNWPSERGV LSENILDGIK FDPQSDSSVV AQLLREHIQL TGRRYQSTEL
FRRIETVCGY VISRHTAADL ESHLSYLADT AIARLHSSYA ALRTITWAIP ILGFLGTVIG
ITMAIANVTP EQLESSLNEV TSGLAVAFDT TALSLALSMI LVFATFAIER GESNVLDQIE
DFTVHRLLGF FPAEKSSEVS PLLAAEHDVA RRFLDQADVL TRQHLEAWNN TVATCREQWA
LLATEQGHSL AGALSAAMHE ALSTQQQLLQ QTQAESRREV EALQASFAEN LCLMQQQLAE
SVRSQLELMH QSWKSASEAQ SSIQHQFTSA LAGAIDAVQQ NVSTLAGSLQ DVSTHSLAQA
EALERQTIQI SSLVGSSQQL IQAESLLAEN LATLRQTQTL EETLLNLNAA VHLLSARAHH
RAA
|
|---|
| |