Gene Plim_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1819 
Symbol 
ID9138520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp2367091 
End bp2367747 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content55% 
IMG OID 
Productpeptidase A24A prepilin type IV 
Protein accessionYP_003629848 
Protein GI296122070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.554319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGATA TGAATCCACA GACCATGGTG TTTCTGGCCG GTGTGCTCGT CCTGACGACG 
ACAGCGGCTT ATACCGACCT GCGGTACTTC CGGATTTACA ACTGGTTGAC GTTACCAGCA 
TTTGCTCTGG GTTGGATCTA TCAGGTCGCC TTCTACGGCC TTCCAGGGCT GGCCGATGCA 
GGCCTGGGCT TTGCGATTGG CTTTGGGCTG TTCTTTCTGC TGTTTGCCAT TGGTGCCAGT 
GGTGGTGGCG ATACCAAGCT GATGGGCGCA CTCTCTGTCT GGCTCGGTTG GAAGTTAACG 
CTTTATACGG TCGTGCTGAC GATTCTCTTT GTGGCAATTG GATCAGTTGT CATGCTGATC 
TGGAGCGTGC TGCGACGAGG TGTCTCGAAA ACTCGAGAAG ACCTGCGGGC CTCGACGCTC 
AAAGACGAAA ATGGAAAGTG GCGAAAGTCT CAGACAGAGA GTTTGCGACG AGTCGGTGGC 
CTGATGGCTT ATGCCGAACC GATTGCCCTC GCGACATGGT GTGTGCTCTT TCTGGATGCC 
ACTGTGTTAC ACGTCAGTCA GCGGAAAGTC GAAAAGGCAC CTGCGGCGGC TGTCTCTAAC 
GATCATCAGC CAGTTGCAGC CAGCCATGAG GCGGGGCCCA GGCTCGCCAA TCATTAG
 
Protein sequence
MFDMNPQTMV FLAGVLVLTT TAAYTDLRYF RIYNWLTLPA FALGWIYQVA FYGLPGLADA 
GLGFAIGFGL FFLLFAIGAS GGGDTKLMGA LSVWLGWKLT LYTVVLTILF VAIGSVVMLI 
WSVLRRGVSK TREDLRASTL KDENGKWRKS QTESLRRVGG LMAYAEPIAL ATWCVLFLDA 
TVLHVSQRKV EKAPAAAVSN DHQPVAASHE AGPRLANH