| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1817 |
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| Symbol | |
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| ID | 9138518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2365470 |
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| End bp | 2366474 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_003629846 |
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| Protein GI | 296122068 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.745683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTCGAC TGACCCCTGC TCTTCTGACG CTGGTAATGT TCGGTGTCGT GGGACTTCTC
GTGGTCGCCT ACATCGGAAA ATCACTCCTG GCACGTGAGG AGAAAAAGCC CGTCATTGCC
ACCCGCAATG TGCCCATGGC GATCTCCGAT ATTGAACCGG GAACTCTCAT CACCGAAGGT
CATATCGGGT TGGGGCCCGT GCAGAACAGT CAATTGAAGC CCGACATGCT GCTGGCCAAT
CGTGTGATCG TCGGACGAGT GGCACGGACC AAAATTCGAG CCGCCGAACC AATTCGCGCC
GGCCAACTCT ATCAACCCGG TGAACTCCCG GATCTGAGAG TTGCCGACGG TATGCGGGCG
GTCTCCATTT CGGTGGCGGA AATGGTCGGC ATTGTGGATG GCATGATCAA GCCCGGCAAC
TACGTCGATG TGCTCTTCAC GGTCGAATCT CAATCGAATG CCGATTTGCA AGGTGGCGTG
ACAATGCGAC TTTTCGAAGG AGTCAAAGTC ATTGCCATCA ATCGCAGTTT CACACAGAGC
CGAGTTGAAC GCGGTGTGAA CCGAGTCACA CTTGAACTGA CCCAGGCCCA GGCCAACATC
ATTACTCTTG CTGAGGCCAA AGGGGCATTA ACACTGATTT TCAATCCGAA TGGTGCGGGA
AGCGGGGGAT TAGCACTCAC AAACTCGGAA CGTGTGACAC TCAATGAGAT CCTCGGACTT
GAACCACCTG CTCCGCCGCA GCTCCCACTC CTCACTGAAA TTTACCGGGG TCAAGCGAGG
CGTGTCCAGC ATTTCAACAA GCAAGGCAGG CTGCTCGACG TTACCGAAGT TCCTCCCCCC
GCGCGAGATA ACGGTCAACA GGTGCTTCCG CGAGGAGATA ACTCGGTACC TGCCGCACAG
GATCCGGCAC CTGCTTCGAA TGCTCCCAGT GCAAACAATG CTCCCGCACC ACTGAAAAGT
ATGGCCCCCA CGGCCGTTCG CAATTTGTTG AATTTCCGGC AGTAG
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| Protein sequence | MRRLTPALLT LVMFGVVGLL VVAYIGKSLL AREEKKPVIA TRNVPMAISD IEPGTLITEG
HIGLGPVQNS QLKPDMLLAN RVIVGRVART KIRAAEPIRA GQLYQPGELP DLRVADGMRA
VSISVAEMVG IVDGMIKPGN YVDVLFTVES QSNADLQGGV TMRLFEGVKV IAINRSFTQS
RVERGVNRVT LELTQAQANI ITLAEAKGAL TLIFNPNGAG SGGLALTNSE RVTLNEILGL
EPPAPPQLPL LTEIYRGQAR RVQHFNKQGR LLDVTEVPPP ARDNGQQVLP RGDNSVPAAQ
DPAPASNAPS ANNAPAPLKS MAPTAVRNLL NFRQ
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