| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1813 |
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| Symbol | |
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| ID | 9138514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2360164 |
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| End bp | 2361444 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | type II secretion system protein |
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| Protein accession | YP_003629842 |
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| Protein GI | 296122064 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00328504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTCCTT TAACTTTTAC AAATTTGATG TTATTGGCCA TGGGGATCAT CAGTCTGATC
CTCCTCTACC GTCTGGCCAG GCGCTGGTTA AGTGCCCGCA GCAAAGTTGT CAGAGAGAAC
TCGGAAGCAG ATCAGTCCCA GTGGTCGCTG GCGAAAGCCA ATTCCGCAGC GCCAGAAGCG
GCCATCACAA CACCGTCAAC AGTTCAACTC GACGCGAAGC CAGTGACTGA AGACATTTCG
CCAGCAACCG AAGGTCTCAG TATTCTCAAG ACCGCTTATG TTCCTGCGGG CAAAGCGAAT
ACCGGTGGCC CTGCCCGCTG GGAAAATGAG AAACTCTTTG TCGATTCATC GAGCACTTAT
CGAGATCGCA GCCGGGGTTT GCCTCGAGTG CTCGCAGAAG ACTTGCCTGA TGAACTCAAT
CAAGGCGAAA TGACATTTGG CGCATTAACG CCCGCTCTAG CCTCGCTCTT GCCGGAAGCG
GGGAGCCGCC AGGATTCCAT CCGCTCGGAT CTTTATGCTG CGGGTTATTA TTCGCCGCGG
GCAGTGATGA ACTTTTCTGC TGTTCGTTAT CTGGCAATGA TTCTTCCCAT GCTCTTCTGC
GGCGTACTAC TGCTATTCGT ACCTCCGCGA TTCGAGCCGA TTGTCATTGG TGCCATCGTT
CTCATGCCGA TCGTGGGCTG GTCGCTCCCG CGACTGATGG TTCGCAACAA GGCTCGCGAC
CGCCGCAACG AGATCGAAAA GGCCATGCCC GATCTTCTCG ATATGTTGAA TATGTGTGTC
AGTCAGGGGA TGACGGTGCC TGCATCGCTG GAACGCATTC GCGTCGAAAT GAAAGGTGCC
TACCCGGCCC TGGAGCAGGA ACTGAAGATC ATCAACGAAC AGTCGAGAAT TGGCTCGATG
GACGTCGCGC TGAAAAACTT CAGCCAGCGT GTTGATGTGC CGGAAGTTCA CTCGTTTACG
TCGCTGTTGA TGCAGACTTC CCGTATGGGG ACAAGTGTCA GTGGTGCCCT GACTGAATAT
GCTGAAACGA TGCGGGAAAG TCTCAAACAG CGTGCGGAAG AAAAAGGAAA TCGGGCCACA
TTCCGCCTGC TCTTCCCCAC TGTGCTCTGC CTGATGCCGG CGGTCTATCT CTTCCTGATG
GGGCCCGCCA TTATCGAACT TTCACGATTC TTCTATGAAG GCGGTCGCGA TGGACTGGAT
ACGGGGTCAT CGGTCATTCA ACGTCTGAAT ACCAACGCCC GTAACCGAGT CGATGGCCAG
CAGGGACAGC AAGCTTTCTA A
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| Protein sequence | MFPLTFTNLM LLAMGIISLI LLYRLARRWL SARSKVVREN SEADQSQWSL AKANSAAPEA
AITTPSTVQL DAKPVTEDIS PATEGLSILK TAYVPAGKAN TGGPARWENE KLFVDSSSTY
RDRSRGLPRV LAEDLPDELN QGEMTFGALT PALASLLPEA GSRQDSIRSD LYAAGYYSPR
AVMNFSAVRY LAMILPMLFC GVLLLFVPPR FEPIVIGAIV LMPIVGWSLP RLMVRNKARD
RRNEIEKAMP DLLDMLNMCV SQGMTVPASL ERIRVEMKGA YPALEQELKI INEQSRIGSM
DVALKNFSQR VDVPEVHSFT SLLMQTSRMG TSVSGALTEY AETMRESLKQ RAEEKGNRAT
FRLLFPTVLC LMPAVYLFLM GPAIIELSRF FYEGGRDGLD TGSSVIQRLN TNARNRVDGQ
QGQQAF
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