Gene Plim_1800 details

Gene Information

• Locus tag: Plim_1800
• ID: 9138501
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2336712
• End bp: 2338652
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 53%
• Product: heat shock protein Hsp90
• Protein accession: YP_003629829
• Protein GI: 296122051

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACCG CCACCCGCGA AGAATTCACA TTCCAAACAG AGATCAAGCA GCTTCTCAAC 
ATCCTTTCGC ATTCGTTGTA TCAGAATCGC GAAATCGCAG TTCGTGAACT CATTTCCAAT 
GCGTCCGATT CACTCAACAA ATTGCGTCAT ATCCAACTCT CTGAAGCACA GTACCGGGAC 
GATGCCGCAC TCAAAATCAC ATTGCTCCCT GACGCGACCG CGAAAACGTT AACAATCGTG 
GATAATGGAG TGGGGCTGAC TCGCGAAGAA CTGATTGAGA ATCTGGGGAC GATTGCCCAC 
AGCGGTTCGC TGGATTTCAT GAAGAAAGCG GCTGAGGCTA AGTCCGCTAA TCATGATGCG 
GATTCCTCCG GCAGCAAATC AGACCTTTCC TTGATTGGGC AGTTCGGTGT CGGCTTCTAT 
GCCGCCTTCA TGCTGGCAGA TACCGTTGAA GTGATCACTC GCAGTTATCG CGAAGAAACC 
GGTTGGAAAT GGACATCCGA TGGCACCGGA CAGTACTCGA TTGAGCCGGT CGATGAAGCA 
CCACGGGGTG CACAAATCGT GCTGCATCTC AAAGAGGATG CCATAGAAGA GTTCACTAAA 
GAATATCGGC TCGAGTCGAT TGTTCGCCGG TACTCGACAT TTGTGCCGCA TGCCGTCTAT 
GTGGGCGAAA AGCACGTCAA CAATCAGCCA CCCATCTGGG TCGAGCCTAA GTCGCAGGTG 
ACGCCCGAGC AGTACAAGAG CTTTTATCAA TGGCTCACAC ACCACGCGAA TGAAGAGCCT 
TTGTGGCATC TGCATCTCTC GGCAGATTCG CCGCTGCAGT TTCAATCGAT TCTGTATTGT 
CCGCCAGTCA ACCTTGAACT GCAGGGGTTC GGTCGCCTTG AACACGGTCT GACGCTGTGC 
GCGAAAAGAA TTCTCGTTCA GGACGATAAC AAAGATCTGC TGCCTGATTA TCTGCACTTT 
GTCTATGGAT TGGTCGATTC CGCCGACCTT CCGCTCAACG TATCCCGCGA AACCTTGCAG 
GACAATCGGC TGATTCCCAA GCTGCGGAAG GTCTTAACCA AGAAGGTTCT CGATTATCTT 
GCGGAGCTCG CCGAAGAACA GCCGGCGACC TATGCCAAAT TCTACGAGCA GTTCGGGATG 
GTGCTACGTG GTGGAGTGGG GGTTGATTTC GAGAATCGCG AGAAAATCGC CCGCCTGCTT 
CGGCTAGCAT CATCGCATGA TGTCACTCCC GGGGCCACCA CATCGCTAGG CGAATATGTC 
AAGCGGATGC GTGAAGACCA GACACAGATC TATTATCTCG GCGGACCAGA TCTGGCGAGT 
CTGCTCAGGA ACCCGCATTA CGAAACATTC CGCGACCGTG GTCTGGAAGT GCTCTTCCTC 
ACTGATCCCG TCGATGAGTT CGCGCTTTCG CATCTGCAGG AGTTCGATGG AAAATCATTG 
GTTTCGATTG ATTCTGCGGA TATTCAACTT CCCGCTTCGG CCGAATCCCC ATCGAGTTCA 
ACAACCGGTG AAGAGCAGGG CAGTTCGTCA CAAATTGCAC CAGCGGGTTT TGATCGGGTT 
CTTGAAGTCT TCCGCCAGGC GTTGGGTGAA CGTGTGCAGG ATGTCCGTAA GGCCACCCGG 
CTGGCCACCA GCCCGGTTTG CCTTGTCAAT CCGCAAGGCT CCATGAGCAG CCAGTTGCAA 
AAAGTGCTGA GCCAGACCGT AAAGGATTTC AACCTGAGCC GCCGCATTCT CGAGGTCAAT 
CCTCAGGCAC CGCTGATTAG TCGGTTGGCC TCATTGAGCA GTTCCGGCAC CAACGATGAC 
TTTATTGCTG ACTGCGGCCT CCAGCTCTAC GCCTCAGCCA TGCTGCTGGA TGGTTTGGTC 
GTCGAACCAG ATCTGACCGC AGACCGTATG CGGAAACTCA TGGAAGAAGC GGCCGACAAA 
CGAACTGTGA TTATCACCTG A 

 

Protein sequence

MTTATREEFT FQTEIKQLLN ILSHSLYQNR EIAVRELISN ASDSLNKLRH IQLSEAQYRD 
DAALKITLLP DATAKTLTIV DNGVGLTREE LIENLGTIAH SGSLDFMKKA AEAKSANHDA 
DSSGSKSDLS LIGQFGVGFY AAFMLADTVE VITRSYREET GWKWTSDGTG QYSIEPVDEA 
PRGAQIVLHL KEDAIEEFTK EYRLESIVRR YSTFVPHAVY VGEKHVNNQP PIWVEPKSQV 
TPEQYKSFYQ WLTHHANEEP LWHLHLSADS PLQFQSILYC PPVNLELQGF GRLEHGLTLC 
AKRILVQDDN KDLLPDYLHF VYGLVDSADL PLNVSRETLQ DNRLIPKLRK VLTKKVLDYL 
AELAEEQPAT YAKFYEQFGM VLRGGVGVDF ENREKIARLL RLASSHDVTP GATTSLGEYV 
KRMREDQTQI YYLGGPDLAS LLRNPHYETF RDRGLEVLFL TDPVDEFALS HLQEFDGKSL 
VSIDSADIQL PASAESPSSS TTGEEQGSSS QIAPAGFDRV LEVFRQALGE RVQDVRKATR 
LATSPVCLVN PQGSMSSQLQ KVLSQTVKDF NLSRRILEVN PQAPLISRLA SLSSSGTNDD 
FIADCGLQLY ASAMLLDGLV VEPDLTADRM RKLMEEAADK RTVIIT