| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1796 |
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| Symbol | |
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| ID | 9138497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2329145 |
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| End bp | 2332186 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | protein of unknown function DUF1549 |
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| Protein accession | YP_003629825 |
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| Protein GI | 296122047 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTCGC AGTTTTTTCG TGACCTAACG ATCTGGAGCA AGCGAGAGTC GCATCACCGC
CCGGCCATTC AATCTGTTGG GTTGTTGACG GGTCTGGCCC TCTGCTTGCT GATGGCACCA
GCGGTTGCCG CAGAAAAGCT CGATTACAAT CGAGATGTGC GGCCCATCCT GTCGAACAAG
TGCTTTCGCT GCCACGGATT TGACGACAAA AATCGAGCCG CTGGTTTGCG GCTCGATATG
GCGGAGGGGG CACTGGCTGA GCGCGATGGT GCAGCGGCAA TTGTGCCCCA TGCCCCTGAA
GAAAGCCTGC TGGTGGAACG GATCGAGACC AGCGATGTTG ATCTCAAAAT GCCACCACCC
GAGTCACCGC AACAGTTGAC CGAACAGGAA ATCGCCCTGT TGAAACAGTG GATTCGTGAA
GGAGCCGAGT ATCAGCCCCA CTGGGCTTTT GCTCCGCTTT CAAAGCCTGA GATCCCTTCA
GCAATGGCAA CGCCTGTCGA TACTGTGCCT GGCTCACCGC TCGATGGATT CATCGAGAAG
GAGTTGCTGG CTAAAGGGAT TCCGGTCGCA CCCATGGCTT CGCGGGCTGT TCGAATTCGC
CGGCTTTATC TCGATGTGTT AGGGATTCTC CCTTCTCCCG AGGAAGTCGA TCGCTTTGAG
CAGGATGCAG CTCCTGATGC CTGGGAGAAA CTGGTCGATG AGGTTTTGGC CAGCCCGCAT
TATGGTGAGC GCTGGGGGCG GCACTGGCTC GATCAGGCAC GCTATGCCGA TTCGAATGGC
TACACCATCG ATGGAGCCCG TGTGATGTGG CCCTATCGGG ATTGGGTGAT TCAGGCACTG
AATGCGGATA TGCCATTTGA TCAATTTACG ATCGAACAAT TGGCCGGTGA TTTGTTGCCC
AATGCCAGCA AAAAACAACT TGTGGCCACG GCGTTTCATC GCAACACGAT GATCAACGAA
GAGGGTGGAG TAAAAGCCGA TCAATTTCGC CATGAAGCGA TGGTTGATCG CGTGGCGACG
ACAGGGTCGG TCTGGCTGGG CCTCTCGATT GGATGTGCCC AATGTCATAC TCATAAGTAT
GACCCGATCA CACACGAGGA TTTTCACAGG CTCTATGCGT TTTTTAATGC GGCCAAAGAT
GCCAACAATC AGGCGGAAAC TGTTCCAGTT TATGTGAATG AAGTCTTTGG ACTCACGCCT
GCTCAAGACG CGCTCCTGGC ACAACTGAAA GCTCTGCGAA TTGAGCAAGG AAAATTGAAA
GAGGCCGTGG GGAAAGAGAC GAAGGTCGCC AGTGGCGGAG ACCCGGCTGC TGTTCGCTGG
AACCGAGTTG AATTCACGCA GTTTGCTGCT GGAAGTAATG GGGAGCTTGT TCAACTTCCT
GATCAATCGC TGCTGGCCAG TCGGAAACTC GCCGAGAACG ATAACTATGA AGTCACGTTT
GATTGGCCTG AGAAAACCCG AGCCGTCAAG ATTGTGGTTT TGACCCACGA ATCATTGCCC
AGGCAAGGCC CGGGTCTGGC CTCGAATGGT AACTTCGTTC TAAGTGACGT TTCCCTGAAG
CAGAAAGATC GATCATTCCG CTTCGAGCAG GCTTTTGCTG ATCATGAACA ACCTGGCTAC
ACCGCCATCC ATGCCATCGA CAATGATCCT CAAAGTGGCT GGGCAATCAA TGTTTCTGCC
GACCAGACCA AACGCAATCC GCAATTGAAG ATGAACGCTC GGCATGAACT CGTGTTGAAA
GCATCTCAAG AGGTCGAGCC AGGGCCCGTG ACGATCGTGC TTCGACATGA TCGGAATGCT
CATTATCTGA TTGGCCGTTT TGCTGTCGAA CTGGCAGATC AATGGCCTGA GGCGACAACC
TCCTCTTCGC AAATCCAGCA GCTGGCGGAA ATTAACGAGC AGATTCGTCG GCTGGAAGCA
CAAGTCCCAG GGGCTGGCCG TGAATATCTG CAGATGGTGA TGCAGGATTT TCCCAAGCCG
CCACCGACCT ATCTGCTGTT GCGAGGAGAT TTTCTCAATC CCGATCTTCC AAGAGGTGAA
CTTTCCCCTG GCGTTCCTGC GGCCTTGACT GTCTCTACCG GCCCGGCCGA CAAGCTGAAG
AATCGACTTG ATCTGGCCCG CTGGCTGGTC AGCAAAGACA ATGCTTTGAC AGCACGAGTC
TTTGTGAATC GTGTCTGGAT GCGATATTTC GGCCGAGGGA TTGTCGAAAC CGAGAATGAT
TTTGGGATGC AGGGTTCGCT GCCATTCTCA CCAGAGCTTC TCGATTGGCT GGCAGGTCGA
TTTATCGAAA AGAAGTGGTC CATGAAGGCG CTTCATAAAG AGATTCTACT TTCAAAAACT
TACTGCCGGG AGAGCCGAAT CATTTCTCAG GCACTGTCAA AAGATCCACA GAATCGCGCC
TTGGGGCGAC AGCAGCGTCT CCGAGTGGAT GCGGAGATTC TGCGCGATCT GATGCTTTCA
GCCAGCGGGT TATTGACTCC CACGATCGGT GGCCCGAGTG TGTTTCCTCC GCAACCGGCT
GGTGTTTTCC AGTTCACGCA GAACAGTAAA CCTTGGAATG AAGAACAGGG TGAAAATCGT
TACCGCCGGA CGATGTACAC GATGTTCTAT CGGAGTGCTC CGTACCCGCT GCTGGCGACT
TTTGACGCAC CCGATTTCAC TTCAGCCTGT ACACGGAGGC AGCCCAGCAG TACGCCACTT
CAGGCACTTT CGGTGGCCAA CGATCCGATG TTTCTGGAAA TGGCAGGTGG TCTGGCTCAG
CGAGTGCTTC AGGATCAGCC TCGCGATACG GAGGCAGTTG CCAATGTCAT GTGGAAGATC
TGTCTGTCGC GTGCCATGAG CGCCGATGAG CGCGAGATTG TGGCTAGATT CTTCGAAGCG
GAAAAACAAA GGTTTGATCG ATCACCAGAG CAGATCAACA AACTCTTGAA GCCAATGAAA
CGGTTTTCGT GGCCAGCGGA TCTTTCTCAA GCCGAGATTG CAGCCACCAT CAGTCTGGCG
CGACTCGTTT TTAATACCGA TGAGTTTATT ACTCGCAACT AG
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| Protein sequence | MYSQFFRDLT IWSKRESHHR PAIQSVGLLT GLALCLLMAP AVAAEKLDYN RDVRPILSNK
CFRCHGFDDK NRAAGLRLDM AEGALAERDG AAAIVPHAPE ESLLVERIET SDVDLKMPPP
ESPQQLTEQE IALLKQWIRE GAEYQPHWAF APLSKPEIPS AMATPVDTVP GSPLDGFIEK
ELLAKGIPVA PMASRAVRIR RLYLDVLGIL PSPEEVDRFE QDAAPDAWEK LVDEVLASPH
YGERWGRHWL DQARYADSNG YTIDGARVMW PYRDWVIQAL NADMPFDQFT IEQLAGDLLP
NASKKQLVAT AFHRNTMINE EGGVKADQFR HEAMVDRVAT TGSVWLGLSI GCAQCHTHKY
DPITHEDFHR LYAFFNAAKD ANNQAETVPV YVNEVFGLTP AQDALLAQLK ALRIEQGKLK
EAVGKETKVA SGGDPAAVRW NRVEFTQFAA GSNGELVQLP DQSLLASRKL AENDNYEVTF
DWPEKTRAVK IVVLTHESLP RQGPGLASNG NFVLSDVSLK QKDRSFRFEQ AFADHEQPGY
TAIHAIDNDP QSGWAINVSA DQTKRNPQLK MNARHELVLK ASQEVEPGPV TIVLRHDRNA
HYLIGRFAVE LADQWPEATT SSSQIQQLAE INEQIRRLEA QVPGAGREYL QMVMQDFPKP
PPTYLLLRGD FLNPDLPRGE LSPGVPAALT VSTGPADKLK NRLDLARWLV SKDNALTARV
FVNRVWMRYF GRGIVETEND FGMQGSLPFS PELLDWLAGR FIEKKWSMKA LHKEILLSKT
YCRESRIISQ ALSKDPQNRA LGRQQRLRVD AEILRDLMLS ASGLLTPTIG GPSVFPPQPA
GVFQFTQNSK PWNEEQGENR YRRTMYTMFY RSAPYPLLAT FDAPDFTSAC TRRQPSSTPL
QALSVANDPM FLEMAGGLAQ RVLQDQPRDT EAVANVMWKI CLSRAMSADE REIVARFFEA
EKQRFDRSPE QINKLLKPMK RFSWPADLSQ AEIAATISLA RLVFNTDEFI TRN
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