| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1786 |
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| Symbol | |
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| ID | 9138487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2314722 |
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| End bp | 2316380 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
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| Protein accession | YP_003629815 |
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| Protein GI | 296122037 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCATT CCTTCCCATT TCGGGTAATC AGTGATCCCG CCTTCAATAA AGGAACTGCG
TTCAGTATCG AGGAGCGAGA TCGCTACGGG CTGCATGGCC TGCTCCCTCC GCATATCGAA
AGTCTCGACG AACAGGTTCA GCGGGTGTAC GAGGCCTACC AGCGGAAAGA CGATGATCTC
GAACGGCATA TTTACCTTCG GGCACTGCAG GATACGAACG AGGTGCTATT TTACAGGCTG
CTGCTGGAGC ATATTGAAGA GATGCTCCCA ATGGTCTACA CGCCTGTAGT CGGGCAGGCC
TGTCAGCTTT TCAGCCATAT CTATCGCCGG CCGAGAGGAT TGTTCATTTC TTATCCGATG
CGAGACTCGA TTGGCTCGCT CCTCCGCAGC AGGCCGTACC CTGATGTGGA TGTCATTGTG
GTGACGGATG GAGAACGAAT TCTCGGGATT GGCGATCAAG GGGCTGGCGG GTTGGGGATT
CCGATTGGAA AACTTTCGCT TTACACGCTG ATTGGCGGGA TTCGCCCTGA GCGGACATTA
CCCATCGTGC TCGATGTCGG CACTAATAAT GCCGAGCGTC TCAAAGATCC CGAGTACGTT
GGCTGGCGAC ATGAACGCAT TTCGGGGCAG GCGTATTTCG ATTTCATTGA TCAGTTTGTC
AAAGCTGTTC AACAGGAGTT GCCTCAGGTT TGCCTGCAAT GGGAAGACTT TGCGACCCCG
CATGCCAGAC CCATTCTTGA GCGTTATGCC AACAAGTTGC TGACGTTCAA TGACGATATC
CAGGGAACAG CCGCTGTCGC TCTGGGGGCT GTGATGGGGG CTGTGGGCGT CACGGGAAAA
CCATTGCGGG AACAGCAGAT CGTGTTTCTC GGTGCAGGTT CGGCAGCAGT GGGTGTGGAC
GATTATCTGA GGGCGGCTTT AGTGCAGGAC AGATTATCGG AAGTCGAGGC CCGGCAGCGG
TTCTGGATGG TCGATAAAGA CGGGCTGTTG CACTCCGATC GGCATGACCT TTCACCCGAA
CAACAGGTTT ATGTCCAGGA CTCCGCAAAG TTGGCCAATT GGCCAAAAAC AGCCCATGGA
GCCATCGGTC TGGCGGATGT GATTCAGCAG GTCAACGCCA CGATTCTCAT TGGTCTCTCC
ACCGTGGGGG GGGCGTTTAC TGAACCGATC ATTCGCGAAA TGGCGGGCAA AGTCGATCGT
CCTGTGATTC TACCACTCTC GAACCCCACA TCGCGTTCTG AGGCTTGCCC GGAAGATTTG
CTCCGCTGGA CGAATGGCCG GGCTTTGGTG GCAACGGGTT CACCCTATGC TCCAGTTGTG
TGGGAAGGGC GGACAATACC CATTGCCCAG TGCAATAATG TCTTCATTTT CCCCGCGGTG
GGGCTGGGAG TTGTGGCTTC CAAAGCCACG CGAGTGACCG ACGGCATGAT GCTCGCTGCA
GCGCGGGCAC TGGGCGAGCA TTCCCCTGCT CTGAAAGATC CTGCAGGCTC GCTCCTCCCG
CCGCTTTCTG AAGTACGATC TGTCGCCCGT GCCATTGCCG AAGCCGTCGG AATGGAAGCA
CAACGGGCTG GTGTGACCCC CTTAACAACT CGAACTGAGC TCGCGGCCAG AGTCCAGGCC
AGTCAATGGC TGCCAGAATA TGGGCCTGTC GCTGACTGA
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| Protein sequence | MGHSFPFRVI SDPAFNKGTA FSIEERDRYG LHGLLPPHIE SLDEQVQRVY EAYQRKDDDL
ERHIYLRALQ DTNEVLFYRL LLEHIEEMLP MVYTPVVGQA CQLFSHIYRR PRGLFISYPM
RDSIGSLLRS RPYPDVDVIV VTDGERILGI GDQGAGGLGI PIGKLSLYTL IGGIRPERTL
PIVLDVGTNN AERLKDPEYV GWRHERISGQ AYFDFIDQFV KAVQQELPQV CLQWEDFATP
HARPILERYA NKLLTFNDDI QGTAAVALGA VMGAVGVTGK PLREQQIVFL GAGSAAVGVD
DYLRAALVQD RLSEVEARQR FWMVDKDGLL HSDRHDLSPE QQVYVQDSAK LANWPKTAHG
AIGLADVIQQ VNATILIGLS TVGGAFTEPI IREMAGKVDR PVILPLSNPT SRSEACPEDL
LRWTNGRALV ATGSPYAPVV WEGRTIPIAQ CNNVFIFPAV GLGVVASKAT RVTDGMMLAA
ARALGEHSPA LKDPAGSLLP PLSEVRSVAR AIAEAVGMEA QRAGVTPLTT RTELAARVQA
SQWLPEYGPV AD
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