| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1776 |
|---|
| Symbol | |
|---|
| ID | 9138477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 2299666 |
|---|
| End bp | 2300670 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | aspartate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_003629805 |
|---|
| Protein GI | 296122027 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTGGCA CACTCGCATT GGTTGGAGCA ACGGGGGCTG TGGGTCGGAT CATGGTAGGT
CTTCTGGAAC AGAGGCCCGA TCTGGCACGC AAGTATAAGT TTCTGGCTTC TGCCCGCAGT
GTGGGTACCA AAATCACGTT CAAAGGTGTC GAGCATACGA TTGAACTTCT TGAATCCGCT
GCTTTTCAGG GTGTTGATCT GGTGATTGCC AGCACGCCCG ATGAAGTCGC TGCCGAGTTT
CTTCCTGCTG CAGTGGCGGC TGGTTGCAAA GTGATCGATG AATCGGGCTA CTTCCGGATG
AATCCTGACG TGGCACTGGT CATTCCTGAG GTCAATCCCC AGGCAGCACT CGACGCCAAG
GGGATCATTG CCAGCCCGAA CTGCTCGACT ACGCAAATGG TATTGGCACT CAAGCCGTTG
CACGATTTCG GTAAGGTCAA ACGCGTGGTC GTCAGCACTT ATCAGGCAGT GAGTGGCGCA
GGAGTTCAGG GGATCGATGA CCTGATTGGT GCCACTCGCG CTACGTTAGA GCACGAAAAG
TACGAACAAA AAGCTTTCAA GTCGCCGATT GCCTTTAATG CCATCCCTCA GATTGGCGGT
TTTAAGGAGA ATGGTTATAC GAGCGAAGAG CTCAAAATGG TCTACGAAAC TCGTAAAATC
ATGGGTGATG AATCGATCCA GGTGTGTCCG ACTTGTGTAC GTATTCCCGT TGCAAACTGT
CACAGTGAGA CCATTCTGGT TGAAACCGAG AAGCATATCT CTGTCGAGAA GGCCAAAGAA
CTCTTTAGCA GCTTTCCAGG GATTACGGTC ATCGATACGC CAGAGCATGG TGGATATCCC
ATGCCGCACT CCTGCACAGG CAGCGATCAG GTCTTTGTAG GCCGGATTCG ACAGGATCTT
TCTCACCCCA ATGGTCTCTC CTTCTGGTGT GTGAGTGATA ACCTGCGAAA AGGTGCTGCG
ACCAACGCGA TCCAGATTGC CGAACTCCTC GCCTCACGCG TCTGA
|
|---|
| Protein sequence | MFGTLALVGA TGAVGRIMVG LLEQRPDLAR KYKFLASARS VGTKITFKGV EHTIELLESA
AFQGVDLVIA STPDEVAAEF LPAAVAAGCK VIDESGYFRM NPDVALVIPE VNPQAALDAK
GIIASPNCST TQMVLALKPL HDFGKVKRVV VSTYQAVSGA GVQGIDDLIG ATRATLEHEK
YEQKAFKSPI AFNAIPQIGG FKENGYTSEE LKMVYETRKI MGDESIQVCP TCVRIPVANC
HSETILVETE KHISVEKAKE LFSSFPGITV IDTPEHGGYP MPHSCTGSDQ VFVGRIRQDL
SHPNGLSFWC VSDNLRKGAA TNAIQIAELL ASRV
|
|---|
| |