Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1775 |
Symbol | |
ID | 9138476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2298240 |
End bp | 2299583 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | diaminopimelate decarboxylase |
Protein accession | YP_003629804 |
Protein GI | 296122026 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGATG TTCGGCTCAC AGGCGAATAT GTTCATCGAC TGACACCTCC ATCTATAAGT GACGTTGTAA TGAATCCTTT CCAGTACCGT GATGGTGAAT TGTTTTGCGA AGAGATCCCA GTTTCTCGAA TTGCCCGTGA CTTTGGCACC CCCTGCTGGA TTTATTCCAA AGCCATGCTG CTGCATCAGC TGGGGCAGAT TCAACAGGCT TTTGCTGCTG TTAATCCTGT CATCTGCTTC TCAGTCAAGG CGAACTCGAA CCTGGGCATT CTCAAGGTGA TGCGGGATGC TGGGAGCAGT TTCGACGTGG TTTCGGGTGG CGAACTTTAC CGTGTGAAAA AAGCCGGAGC CGATACAGCC AAGGTTGTCT TTGCAGGTGT CGGCAAGACA GATGCCGAGA TTCAACTCGC TCTCGAAAAT CAGATTCTGA TGTTCGATGT CGAAAGTGAA CCAGAACTGG ATGCCATTGC TGCAGTGGCT GAAAAAATGG GGGTCATTGC CCCCGTGGCG TTGCGTCTGA ATCCTGATAT TGATGCAAAA ACCCATGCAA AAACCACCAC GGGCAAAAAG GGCAACAAGT TCGGGATGGA TATCGAACGG GTCTTTGAAC TGGCCGACAA AGTTTTGAAG ACTCCCCGGT TGAAACTCGT CGGGATTCAC ATGCATCTGG GTTCTCCAAT TTTGACAACA GAACCCTACG AACTGGCTGG GCAGAAGGCC ATTGAAGTGA CGCGCGATCT GCGTGCTCGT GGACATGAGA TTGGCTGGGT GAATCTGGGT GGCGGGTTTG GCATCAGTTA TCGGGGAAGC GAAGGCTTGC CTGCTTCTGA GTATGCCAAA GTGATTGTGC CAGCCGTTCA GGAAATGGGT GTTCAGCTCG CTCTGGAGCC GGGCCGCTTC ATCACTGGCA ATGCGGGGAT TCTCGTCAGT GAAGTGGTCT ACACCAAGCG GGAAGGTGGC AAACTCTTCG TGATTCAGGA TGCGGCTATG AACGATCTCA TGCGTCCTGC GATGTACGAT GCCTTCCATA AAATCTGGCC AGTGAAGGCT GCCGCCGAAC CGGCTAACTA TGAAGGCAAA ATTGAAGGAT GCGAAGCTTG CGACGTCGTT GGCCCGGTGT GTGAATCGGG CGATTACTTC GCCAAGGGAC GTTATTTGCC GCCAGTTCAG CGCGGTGATC TGATCAGCAT TTTCAGTGCG GGTGCTTATG GGACATCCAT GAGCAGCAAC TACAACTCCC GCCCTCGTGC GGTCGAATTG CTTGTTGATC AAGGGCACGT GCAGGTGGTC CGTCGTCGTG AGACCTACGA CGACTTGATT GCCGCCGAGA TGGATGTTGA ATAA
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Protein sequence | MNDVRLTGEY VHRLTPPSIS DVVMNPFQYR DGELFCEEIP VSRIARDFGT PCWIYSKAML LHQLGQIQQA FAAVNPVICF SVKANSNLGI LKVMRDAGSS FDVVSGGELY RVKKAGADTA KVVFAGVGKT DAEIQLALEN QILMFDVESE PELDAIAAVA EKMGVIAPVA LRLNPDIDAK THAKTTTGKK GNKFGMDIER VFELADKVLK TPRLKLVGIH MHLGSPILTT EPYELAGQKA IEVTRDLRAR GHEIGWVNLG GGFGISYRGS EGLPASEYAK VIVPAVQEMG VQLALEPGRF ITGNAGILVS EVVYTKREGG KLFVIQDAAM NDLMRPAMYD AFHKIWPVKA AAEPANYEGK IEGCEACDVV GPVCESGDYF AKGRYLPPVQ RGDLISIFSA GAYGTSMSSN YNSRPRAVEL LVDQGHVQVV RRRETYDDLI AAEMDVE
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