Gene Plim_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1758 
Symbol 
ID9138459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp2278122 
End bp2278871 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content52% 
IMG OID 
Productregulatory protein DeoR 
Protein accessionYP_003629787 
Protein GI296122009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.299089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTGG ATCAACGCCG TCGACATGTG CTCGAACTCA TTGAAGAAAA AGGCTTTATA 
TCGCTTCATG AGCTTGCGAC CAAAACCGGG GTCAGCGAGT CAACACTGAG GCGGGATTTG 
GAATATCTTG ACGGAATTCG GCAGGTTCGC CGCACACGAG GCGGGGCTGC CTATGTCGGT 
GAATCGGTTG TTTCTCTGGA AGAGCGAAGT GTGACCTCTC TGGTCGAGAA GCAGAGAATT 
GCTCGTTCGA TCTCGGAAAC GATAGGAAGT GGTGAAACAG TCCTGCTCGA TGGGGGAACG 
ACAACGCTTG AGGTGGCTCG TGCCTTGATT GGCAAAGAAC TGCAAGTTGT GACCAATTCC 
CTGGCGATTG CCAATTTGCT GGTGAACAGC CCGGGTGTGG AATTGATTTT TTTAGGAGGG 
TATCTGCATC CCAAAACAGG TGTGACTTTA GGCCCGCTCC TGAATTTGGC GTTATCGCAA 
TTGCAGGTCC CTCGCATGGT TTTCAGTGTC GGTGGCGTGA CGGAGAAAGG CTTGTTCAAC 
AGCAACACCC TCCTCGTTGA GGCCGAGCGG CGGATGATTG ATGCCGCTGA ACGAGTGGTG 
CTGGCGGTTG ATAGTCGGAA GTTTGGAAAA GCAGCCCTCT CCCCACTTTG TCCACTCGAC 
CGTGTTCATG AAATTGTGAC AGACGAAGGG ATTCCCGAAG ATTGGCGAAA GCGGATTGAA 
GACTTGGGAA TTGAACTGCG AATTGCGTGA
 
Protein sequence
MLLDQRRRHV LELIEEKGFI SLHELATKTG VSESTLRRDL EYLDGIRQVR RTRGGAAYVG 
ESVVSLEERS VTSLVEKQRI ARSISETIGS GETVLLDGGT TTLEVARALI GKELQVVTNS 
LAIANLLVNS PGVELIFLGG YLHPKTGVTL GPLLNLALSQ LQVPRMVFSV GGVTEKGLFN 
SNTLLVEAER RMIDAAERVV LAVDSRKFGK AALSPLCPLD RVHEIVTDEG IPEDWRKRIE 
DLGIELRIA