| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1744 |
|---|
| Symbol | |
|---|
| ID | 9138445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 2266426 |
|---|
| End bp | 2267508 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_003629773 |
|---|
| Protein GI | 296121995 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCC GAATTTTTAA CTTTTCTGCC GGCCCTGCCA TTATTCCAGA ATCCGTCCTC
GAAGAAGCCA AAGAAAACCT CCTGTCTCTG GGTTCGACGG GCATTGGGAT TATGGAGCAT
TCGCACCGTG GTAAGGCGTT TCTGGCGGTT TACGAACAGG CTGTCGCTCG TTGCCGGGAG
CTTGCCGGGA TTTCCAATGA TTACGAAGTT CTTTTTTTGC AAGGGGGGGC CTCTCTTCAG
TTCAGCATGG TGCCGATGAA TTTTCTCACA TCCGGCCAGA CTGCCGATTA CCTGATCACC
GGTGTCTGGT CCGAAAAAGC TCGGGAAGAA GCACAGCGGG TCGGCTCCGT TCACGAAGCC
TGCTCCAGCA AAGACAAAAA CTTCACTTAC ATTCCCCAGG AACTGAAGCC AGGTTCATCC
CCTGTCTACA CTCACTTCAC ATCGAACAAT ACGATTTTTG GTACTCAGTT TAGGACTGAG
CCAACGCCCG CAGCCGGCTC GTTCCTCGTC TGCGATGCCT CCAGCGATAT TTTCTCCCGG
CCCATCGATG TTTCCAAATA CGGCATCATC TATGGTGGGG CACAGAAAAA CCTCGGGCCA
TCCGGTGTCA CGCTGGTCAT CATCAGGAAA GATCTCATTG AGCGGGGACA AAAAGAGCTT
CCCACCATGC TTCAGTACCG AACTCATGCC AAAAATGAGT CGATGTACAA TACACCGCCC
ACCTTCGGCA TTTTCATGAT GAATCTCGTC TTTGGATGGA TCATTAAGCA GGGTGGCCTC
GCGTCCATGG CGGCCAAAAA CGAAGCCAAA GCCAAGGTGC TCTATGATTA CCTGGACCAG
AGCCGTTTAT TCAAAGGAAC AGCTCAGGCT GACAGCCGGT CGCTGATGAA CGTGACGTTT
GTCACGGGGA ACGAGGCCAT CGACCAGCAG TTTGTTTCTG AGGCCACAAA AGCCGGTTTC
GACGGGCTCA AAGGGCACCG GAGTGTCGGC GGAATGCGTG CCAGCATTTA CAACGCTTTC
CCACATGAAG GTGTGGTCGA ACTTGTCAAA TTCATGAGAG ATTTCGAGGC CCGCCAGGCG
TAA
|
|---|
| Protein sequence | MTARIFNFSA GPAIIPESVL EEAKENLLSL GSTGIGIMEH SHRGKAFLAV YEQAVARCRE
LAGISNDYEV LFLQGGASLQ FSMVPMNFLT SGQTADYLIT GVWSEKAREE AQRVGSVHEA
CSSKDKNFTY IPQELKPGSS PVYTHFTSNN TIFGTQFRTE PTPAAGSFLV CDASSDIFSR
PIDVSKYGII YGGAQKNLGP SGVTLVIIRK DLIERGQKEL PTMLQYRTHA KNESMYNTPP
TFGIFMMNLV FGWIIKQGGL ASMAAKNEAK AKVLYDYLDQ SRLFKGTAQA DSRSLMNVTF
VTGNEAIDQQ FVSEATKAGF DGLKGHRSVG GMRASIYNAF PHEGVVELVK FMRDFEARQA
|
|---|
| |