Gene Plim_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1739 
Symbol 
ID9138440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2259297 
End bp2261714 
Gene Length2418 bp 
Protein Length805 aa 
Translation table11 
GC content56% 
IMG OID 
Productprotein of unknown function DUF1549 
Protein accessionYP_003629768 
Protein GI296121990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTTG CTCTCTCATG GCGACTGCTT AACTCGACGT TTCTGGTTAC TATGGTCTGT 
GTATTCCTCT CGCAGCACAG CCTGGGAGAA GATGCGAAAG AGCAGGCAGT CAAACTCTTT
CGCGAGACAG TCGCACCGGC GCTCGCAGCC AAGTGTGTGA GCTGTCATCG GGCGGATAAT
CTCAAGGGGC AGTTCGACAT CACGACAGCC CAGAATCTCC TCAAAGGGGG AGAGAGTGGT
GTGGCACTCG TTCCCGGCCA GCCTCTTGCA AGCTCGCTCT ATCTCAGAAC CATCCCGCAC
GAGGGTGAAA AGCCCGAGAT GCCCGAAAAG GGAGAGGCTC TTACCGAACG GGAAGCTGAG
TCACTCAAGC AATGGATCAG TCTGGGCGCT CCGTGGCCAG AGGGATTTGT GCTCAAGGAA
AAATCCAAGG CCGATGCCAG CTTCTGGTCG TTTCAACCTT TGGCCGAGGT TGTCCCCCCT
GATGTCACAT CAGGGCCTGA ATCGTGGCGA ACGCATCCGA TTGACCGTTT TCTACTGCAG
GAAATGCAGG CGAAAGGGTT ATCACCCAAT CCTCCCGCCA CTCCCAACGA ATTCATTCGC
CGGATCACGT TCGATTTAAC CGGCTTGCCA CCGACACCTG AGGAAATTGA GCAGTTTGTC
CAGGCCTGTC CCCATGGCCA GCATGATGCT GCTATCGAAC AGTTGATTGA CCGTCTTCTC
GCCAGCCCAC GGTACGGTGA ACAATGGGGG CGACACTGGC TCGATGTGAT CCGCTTCGGT
GAGAGTCGTG GCTACGAACG CAATGAGATC ATCACCAACC TCTGGCCGTT CCGCGATTAC
ATCATCCGCA GTTTCAATGA GGACAAGCCG TTCGACCGCC TGATTCACGA GCATCTGGCG
GGTGATGTCA TTGGCAAAGA TCAGCCGGAA ATCGAAGTTG GCTCGGCCTT TCTGGTGGCG
GGGCCTTACG ATGATGTGGG AAATCAGGAT GCTGTCGCAG CGGCCCAGAT TCGAGCTGAC
CAGATGGATG AGATGATCCG CGCGACGGGT GAAGCATTTT TAGGGTTATC AATAGGCTGT
GCCCGTTGCC ATGACCACAA GTTTGACCCG ATTCTCGCCC GCGACTACTA CGCCTTCTAC
GCCACCTTTG CGGGGACAGT CCATGGGCCG CGGGAAGTTG CTACATCCGA GGCTCGCCAG
GCTCGCGCTA CGGCGCTTGA GCCTCTGCAG AAGCTCAGGC AGCCCAAACA CAATGAGAAG
GCCGAGATCG AGAAGCGACT GGCGGAACTC AAGAAAACAC AGACCGAATC CTCTTCCGAA
AACTCCGAGG ACGATTCCAT CGCGAAACTG CAGGATCGGC TAAGCGTATT GAAAGCTGAG
ATTGCGGAAC TCGATGGTCA GATCTCGAAA ATTCCCGCAC TCCCTGTCTG GTGGGTGGGA
AACCATCGAT CGGCACCCGG CCCGTTTCAT GTTTTTGTGG GAGGTAACCC CCAGCAGCGC
AGTGAGATCG TGTTGCCCTC CGGGCTCGAT GTCTTCAACG CACTTCCGTC GAAATACGAA
GTGGCAGATC TGGCCCATGA AGCCACACGT CGAGTCGCTT TGGCCAAGTG GCTGACGGCA
CCCGACCAGC CACTTGTGCC ACGCGTACTG GCAAATCGCA TCTGGCAGTA TCACTTTGGT
TCCGGGATGG TCGACACGCC CAGCGACTTC GGATATCTCG GAGGCCGGCC GACGCACCCT
GCTCTGCTGG ATTGGCTTGC GAAAGAACTG GTCAAAAGTG GCTGGAAGCT TAAGCCGATT
CACAAGCTGA TTCTGACTTC CCAGGCTTAC AGGCAATCGT CGGACTGGCG GGAGGATCAA
GGAAAGCGTG ACGCCGCCAG TCGTCTCTTG TGGCGATTTC CTCCCAGGCG TTTGAGTGCT
GAGGAAATCC GCGATTCCAT GCTCAATGCC GCTGGAGTGC TTAACCTGTC GATGGGTGGG
CCTGGTTTTC GCCTGTATGA GTATCAGCAG GATAACGTGG CGACTTATGT TCCTAAAGAT
ATCCATGGCC CGGAGACTTA CCGTAGAACT GTTTATCACC ACACAGCGCG TGCCTCTCGT
GTCGATGTGT TGACTGATTT TGATTGCCCC GATCCGGCCC TCGCCGAGCC TCGGAGGGCT
TCGACCACCA CTCCGCTCCA GGCTTTGACG ATGATGAACC ATCAGTTCTC CATCGATATA
GCCACAAAGT TCGCCGACAG AGTGGAGCAG ATCAACTCAG ATTCCCAAGC CCGCATACAA
TTGGCATTTC TCCTCGCGTA TGGTCGTCCA CCCACCGATC GGGAGATCTC TCAAGCGGCG
AAGGTGATTC AGCAGGTAGG TCTGAAGGCG TTTTGCCATG CCCTGCTCAA TTCCAATGAG
TTCATCTTCA TCCGCTGA
 
Protein sequence
MRFALSWRLL NSTFLVTMVC VFLSQHSLGE DAKEQAVKLF RETVAPALAA KCVSCHRADN 
LKGQFDITTA QNLLKGGESG VALVPGQPLA SSLYLRTIPH EGEKPEMPEK GEALTEREAE
SLKQWISLGA PWPEGFVLKE KSKADASFWS FQPLAEVVPP DVTSGPESWR THPIDRFLLQ
EMQAKGLSPN PPATPNEFIR RITFDLTGLP PTPEEIEQFV QACPHGQHDA AIEQLIDRLL
ASPRYGEQWG RHWLDVIRFG ESRGYERNEI ITNLWPFRDY IIRSFNEDKP FDRLIHEHLA
GDVIGKDQPE IEVGSAFLVA GPYDDVGNQD AVAAAQIRAD QMDEMIRATG EAFLGLSIGC
ARCHDHKFDP ILARDYYAFY ATFAGTVHGP REVATSEARQ ARATALEPLQ KLRQPKHNEK
AEIEKRLAEL KKTQTESSSE NSEDDSIAKL QDRLSVLKAE IAELDGQISK IPALPVWWVG
NHRSAPGPFH VFVGGNPQQR SEIVLPSGLD VFNALPSKYE VADLAHEATR RVALAKWLTA
PDQPLVPRVL ANRIWQYHFG SGMVDTPSDF GYLGGRPTHP ALLDWLAKEL VKSGWKLKPI
HKLILTSQAY RQSSDWREDQ GKRDAASRLL WRFPPRRLSA EEIRDSMLNA AGVLNLSMGG
PGFRLYEYQQ DNVATYVPKD IHGPETYRRT VYHHTARASR VDVLTDFDCP DPALAEPRRA
STTTPLQALT MMNHQFSIDI ATKFADRVEQ INSDSQARIQ LAFLLAYGRP PTDREISQAA
KVIQQVGLKA FCHALLNSNE FIFIR