Gene Plim_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1722 
Symbol 
ID9138423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2235496 
End bp2236458 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content55% 
IMG OID 
ProductPyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_003629751 
Protein GI296121973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACCA TCAACCTCTA CGAGAATATC CAATCTGCTG CTGTGCGCAT CGCCCCTTGG 
ATCCACCGCA CGCCAGTCCT CACCAGCCAT ACGTTGAATA AATTGTGTGA GGCTGAACTT
TACTTCAAGT GTGAAAACCT CCAGCGCACT GGTTCATTCA AGGTTCGTGG AGCCCATAAC
GCCACATTCC TGCTGGAGGA GGAGCTGGCA CACAATGGAG TCGTGACGCA CTCCTCTGGT
AATCATGCGG CGGCACTCGC ATTGGCGGGA AAGAATCGAG GGGTACCGGC CTTTATCGTG
ATGCCTGGTA ACGCTCCGAA GGCAAAAATC GAATCGACCA GAAGACTCGG CGGTAACGTG
ATCCTCTGTG AACCAACAGC AGCCGCACGT CAGATGGCGG CTGATCAACT GGTTCAAGAA
ACGGGTGGAA CGCTGATTCA TCCCTTTGAC GACCTGCGGA TTGTCGCAGG GCAGGGGACA
TGTGCCTTGG AACTGCTCGA CGAAGTCCCC CACCTGGATG CCATCGTGGC ACCGGTTGGT
GGTGGAGGTC TCCTCAGCGG AACGGCCATT GTTGCTCATC ATCACAGCCA GGCGACTGAC
CACCAATGTT TGACTTTTGG AGCTGAGCCC ACCGGTGCCG ATGATGCGGC TCGTTCGTTA
GCGACTGGCG TTCGGCAGCC TATGAACTCA CCTCAAACGA TTGCTGATGG TTTGCGGACA
GCTCTGGGTG AGAACACATT CCCCATTATT CAACAGCATG TCGCTGCCAT CGGCACCGTT
TCCGATGAAG AGATTCTCAA AGCCACCAGG CTGCTCTGGG AAGTGATGAA GATTGTGGTT
GAGCCATCAG GAGCCGTCCC TTTTGCAGCG GTCTTGCAAA ATCGACTCCC ACTGCGTGGC
AAAAAAGTGG GCCTCATTCT CAGTGGGGGG AATCTCGATC TTGATCGCTT GCCCTGGTCT
TGA
 
Protein sequence
MPTINLYENI QSAAVRIAPW IHRTPVLTSH TLNKLCEAEL YFKCENLQRT GSFKVRGAHN 
ATFLLEEELA HNGVVTHSSG NHAAALALAG KNRGVPAFIV MPGNAPKAKI ESTRRLGGNV
ILCEPTAAAR QMAADQLVQE TGGTLIHPFD DLRIVAGQGT CALELLDEVP HLDAIVAPVG
GGGLLSGTAI VAHHHSQATD HQCLTFGAEP TGADDAARSL ATGVRQPMNS PQTIADGLRT
ALGENTFPII QQHVAAIGTV SDEEILKATR LLWEVMKIVV EPSGAVPFAA VLQNRLPLRG
KKVGLILSGG NLDLDRLPWS