Gene Plim_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1716 
Symbol 
ID9138417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2227382 
End bp2229019 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content53% 
IMG OID 
ProductCTP synthase 
Protein accessionYP_003629745 
Protein GI296121967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGC ATATTTTTGT GACCGGTGGT GTTGTCAGTT CGTTGGGCAA GGGGCTTACA 
TCTGCGTCGA TTGGCACGAT TCTGGAAAGT CGCGGGCTGA AAGTCCGGAT GCAGAAGCTC
GATCCTTATA TCAACGTGGA TCCCGGCACC ATGAGCCCTT ACCAGCATGG CGAGGTTTAT
GTTCTTGATG ATGGTGCCGA GACCGACCTT GATCTGGGGC ATTATGAACG GTTTACGCAC
AGCCCTCTGA CGAGAGATTC CAATTTCACG TCTGGTCGCA TTTATCTCAA AGTGATCGAA
AAAGAGAGGC AGGGAAAGTA CCTCGGCGGA ACCGTACAGG TGGTTCCCCA TATCACCGAC
GAAATCAAGA ATTCCGTATT GAAACTCGCT GCTCCCGATG TGGATGTGGT AATTACCGAA
CTGGGTGGGA CAGTTGGCGA TATCGAAGGT TTGCCGTTTC TGGAAGCGAT TCGTCAGATT
CCCCTCGATA TCGGCCGCGA AAACTGCCTG TTCATTCATC TGACTTTGGT GCCCTATCTC
AAAGCGGCTC GCGAGTTGAA AACAAAACCA ACTCAGCACA GTGTGCAGCA ACTTCGCCAG
ATTGGTATTC AGCCAGATGT CCTCATCATT CGTTGCGAAC GACCGCTGGG TCGAGACAAC
GCCGAGAAAA TCGGCTTGTT CTGTAACGTG GAAAAAAACG CAGTCATCGA GGAGATGGAT
ACGGAATTTT CGATTTACGA AGTTCCACTA GGCCTGATCG AACATGGCCT CGACGATTTG
ATTGTTCGCA AACTGGGCTT GAAGGCTGGT GAACGCCAGA TGGAGGGCTG GGAACTTCTC
GTCCAGAAGA TTCGAAATCC GCAGCATGAT GTCACGATTG CCGTGGTGGG CAAGTACATC
GAACATCGCG ATGCTTATAA GTCGATTTAC GAATCGCTCG ATCATGCGGG ATTCAAGCAT
GATTCACGAA TCATCGTCAA ACGGATCGAA GCCGAAGAAC TCGAACAGCA GGATCCTGCA
GCCATCCTGG CCGGTGTGGA TGGAATTCTT GTCCCCGGCG GCTTTGGTCG GCGGGGGATT
GAAGGCAAAA TTCGTGCGGT TCGTTTTGCG CGAACTCAAA AGATTCCTTA CTTCGGAATC
TGCCTGGGAA TGCAGGTGGC GGTCATCGAG TTTGCCCGAG AAGTGCTGGG CCACAAGAAT
GCGAACAGTA CCGAGTTCGT GGCGGATACG GATCATCCCG TCATTTGCCT GCTTGAAGAA
CAAAAGAAAG TGACTCATCG TGGCGGAACC ATGCGACTGG GTGCTCAGGC ATGCCGCCTT
GCAGAGGGCT CGTTATTGGC CAAACTTTAC GGCCGTACGG AGATTTCCGA GAGGCATCGA
CACCGCTACG AGTTCAATCC TGAGTATCGT GACCAGTTCA TGGCGGCAGG TATGAATCTC
GTGGGAACGA GTCCGGATGG GTCGCTCGTT GAGGCTGTGG AACTCCCCGG GCACCCATGG
TTTGCTGCTG TGCAGTTTCA TCCGGAATTC AAGTCGAAAC CCCAGTCACC GCATCCGCTG
TTTGATGGAT TCATCAAGGC TGCACTCCAG CGCCATCAGG AACGAGCGCT TCTGGCCGCG
GCTGGAACGA CTCCCTAG
 
Protein sequence
MSKHIFVTGG VVSSLGKGLT SASIGTILES RGLKVRMQKL DPYINVDPGT MSPYQHGEVY 
VLDDGAETDL DLGHYERFTH SPLTRDSNFT SGRIYLKVIE KERQGKYLGG TVQVVPHITD
EIKNSVLKLA APDVDVVITE LGGTVGDIEG LPFLEAIRQI PLDIGRENCL FIHLTLVPYL
KAARELKTKP TQHSVQQLRQ IGIQPDVLII RCERPLGRDN AEKIGLFCNV EKNAVIEEMD
TEFSIYEVPL GLIEHGLDDL IVRKLGLKAG ERQMEGWELL VQKIRNPQHD VTIAVVGKYI
EHRDAYKSIY ESLDHAGFKH DSRIIVKRIE AEELEQQDPA AILAGVDGIL VPGGFGRRGI
EGKIRAVRFA RTQKIPYFGI CLGMQVAVIE FAREVLGHKN ANSTEFVADT DHPVICLLEE
QKKVTHRGGT MRLGAQACRL AEGSLLAKLY GRTEISERHR HRYEFNPEYR DQFMAAGMNL
VGTSPDGSLV EAVELPGHPW FAAVQFHPEF KSKPQSPHPL FDGFIKAALQ RHQERALLAA
AGTTP