Gene Plim_1715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1715 
Symbol 
ID9138416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2226493 
End bp2227149 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content51% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_003629744 
Protein GI296121966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCTT CACTTCACTC CAAAGAAAAT TTGAATGAGG GGAAAGAACG TCCAGCGGTG 
ATTCCTGACG GCCTGTCGTT CGATGCCATT ATCTTTGATT GCGATGGTAC GCTGGGCGAT
TCCATGCCCA TGCACTATGT GGCCTGGGTC GAAACATTGA CGCCTTATGG CGCTTTCATG
AGCGAAGATG AGTTCTACGC CATGGGGGGC TGGCCTACAA AAATTGTGGC TCAAACCATG
CTGGATCGGT TTGATATCAA GACTGATCTG GCTGCGATGG TTAAGCACAA AGAGAAACTT
TTTGTGCAGA AACTCAGTGA AGTTCCTCCT GTCCCCCAGG TGGTTGAGGT GGTGCATTAT
TACCACGGCA AAATTCCTCT GGCAGTCGCG ACCGGTGGGC TGCCAGAAGT CTGTTTGGGA
GTGCTGAAGA GTATCGGGCT GTCACCAAAA CTCTTCAATA CCATCGTCAC CTGCGAAGAC
GTTCAGAGCC ATAAGCCGGA GCCAGAGATC TTTCTGGAAG CTGCTCGCCG TCTGCATGTT
CCTCCTGATC GATGCATTGT CTTTGAGGAT GTCGATCCGG GGATTGAAGC CGCCCGCCGG
GCAGGGATGG TTTCAATTGA TGTGCGAACT TTTTACACGC CAAGACGCAT CACGTGA
 
Protein sequence
MDASLHSKEN LNEGKERPAV IPDGLSFDAI IFDCDGTLGD SMPMHYVAWV ETLTPYGAFM 
SEDEFYAMGG WPTKIVAQTM LDRFDIKTDL AAMVKHKEKL FVQKLSEVPP VPQVVEVVHY
YHGKIPLAVA TGGLPEVCLG VLKSIGLSPK LFNTIVTCED VQSHKPEPEI FLEAARRLHV
PPDRCIVFED VDPGIEAARR AGMVSIDVRT FYTPRRIT