Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1715 |
Symbol | |
ID | 9138416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2226493 |
End bp | 2227149 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_003629744 |
Protein GI | 296121966 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCTT CACTTCACTC CAAAGAAAAT TTGAATGAGG GGAAAGAACG TCCAGCGGTG ATTCCTGACG GCCTGTCGTT CGATGCCATT ATCTTTGATT GCGATGGTAC GCTGGGCGAT TCCATGCCCA TGCACTATGT GGCCTGGGTC GAAACATTGA CGCCTTATGG CGCTTTCATG AGCGAAGATG AGTTCTACGC CATGGGGGGC TGGCCTACAA AAATTGTGGC TCAAACCATG CTGGATCGGT TTGATATCAA GACTGATCTG GCTGCGATGG TTAAGCACAA AGAGAAACTT TTTGTGCAGA AACTCAGTGA AGTTCCTCCT GTCCCCCAGG TGGTTGAGGT GGTGCATTAT TACCACGGCA AAATTCCTCT GGCAGTCGCG ACCGGTGGGC TGCCAGAAGT CTGTTTGGGA GTGCTGAAGA GTATCGGGCT GTCACCAAAA CTCTTCAATA CCATCGTCAC CTGCGAAGAC GTTCAGAGCC ATAAGCCGGA GCCAGAGATC TTTCTGGAAG CTGCTCGCCG TCTGCATGTT CCTCCTGATC GATGCATTGT CTTTGAGGAT GTCGATCCGG GGATTGAAGC CGCCCGCCGG GCAGGGATGG TTTCAATTGA TGTGCGAACT TTTTACACGC CAAGACGCAT CACGTGA
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Protein sequence | MDASLHSKEN LNEGKERPAV IPDGLSFDAI IFDCDGTLGD SMPMHYVAWV ETLTPYGAFM SEDEFYAMGG WPTKIVAQTM LDRFDIKTDL AAMVKHKEKL FVQKLSEVPP VPQVVEVVHY YHGKIPLAVA TGGLPEVCLG VLKSIGLSPK LFNTIVTCED VQSHKPEPEI FLEAARRLHV PPDRCIVFED VDPGIEAARR AGMVSIDVRT FYTPRRIT
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