| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1713 |
|---|
| Symbol | |
|---|
| ID | 9138414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2223857 |
|---|
| End bp | 2225251 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | GTP-binding proten HflX |
|---|
| Protein accession | YP_003629742 |
|---|
| Protein GI | 296121964 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.639031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACAATC AACACGTTGG TCATGTCTTT CTGAAAATCA AAGATTCGGA CCTTTTTCTC
CCTGCTCTGG ATGAACCATT GAATCAACCG CTCCGCAATG ATCTTCAAAC TATCAATAAA
ACGGCTGTTC TCGTGGCAGT CTGTTTGAAC GACAACAAAC GCTCGCGGGA AAATGTGCTC
GATGAACTGA AGGGATTGGT CAAAACTGCC GGCGTGAAAG TCGTAGGAGA ACTGGTTCAA
TTTCGGCAGA TGGTTCATCC GGGTACCTGC CTGGGCCCGG GAAAAATTGA GGAACTCAAA
CTCATTCTCG AAGAAACCCG GGCTGAACTG GTGATTTTTG ATAATAATCT CACGCCAGGT
CAGGGCCGCC GTCTGGAGCA GGAGACAGGT CGCGTCATTG TCGATCGCAG TGAGCTGATT
CTCGACATTT TCGCCACGCA TGCCCGGACT GCTGAAGCTC GTCTTCAAGT CGAACTCGCG
CAGCTTCAAT ACAATCGCAC TCGACTGAAA CGTCTGTGGA CTCACCTGGA GCGTATTGAT
GGTGGGATTG GTGCCAGTCG TGGCCCTGGT GAAAAACAGA TTGAAACTGA CCGCCGCTTG
ATTGACCAGC GCATCTCGGA ACTTCAATCA TCACTTAAAG AAGTGGAACA GCGACGGGAA
AGAATGGTCA AGCAAAGGCG CGACCATGCC CTGGTTTCAC TGGTCGGATA CACCAACGCC
GGCAAAAGCA CGCTCATGCG GGCTCTGACA GGCGAAGAGG TCTACATTGC TGACCAGTTG
TTTGCCACGC TTGATACGAA AACACGGCTC TGGAAGATTC CTGGCTGGGG CGATGCTCTT
CTGAGCGATA CCGTAGGTTT CGTGCGTGAC CTGCCCCACT CATTGGTCGC CTCTTTCAAA
TCGACTCTGG AAGAAGCGCG TCATGCTGAT CTTCTCCTGC ATGTCGTCGA CGCGAGTAAC
CCTGAAGCTG AGGCTCAGGT GGCGACTGTC GAAGCAGTGC TGGAGGAAAT TGGTGTTGAA
CTCAAGAACT TCATCCTCGT GCTCAACAAA GCGGATCAGG TTCCTGATCG CATGGCTCTG
GATCTGTTGC GCGCTCGCTA CGAGTGGAGT GTTTCCATCA GTGCCCGGAC TGGTGATGGA
CTGGATCGAC TGGCTCAACT CGTGGTGGAT CGACTAGGTG ATGGACTCGA AAGCGTGACG
GTTTCCACAG GTATTGAAGA TGGTAAACTT CTAGGCTGGC TCTCTGAACA TGCCACCATC
ATCGATACCC ATTATTCTGA AACCACAGCC ACTTTCCGGT GCCGGATTTC GCGCTCCATG
CTGCCGCGGC TTCGCCAGCG CGGGACCGTC CTGGAAGACC ACCACGATCA GTCTTCACTC
GAAGCTGTTG GTTAA
|
|---|
| Protein sequence | MNNQHVGHVF LKIKDSDLFL PALDEPLNQP LRNDLQTINK TAVLVAVCLN DNKRSRENVL
DELKGLVKTA GVKVVGELVQ FRQMVHPGTC LGPGKIEELK LILEETRAEL VIFDNNLTPG
QGRRLEQETG RVIVDRSELI LDIFATHART AEARLQVELA QLQYNRTRLK RLWTHLERID
GGIGASRGPG EKQIETDRRL IDQRISELQS SLKEVEQRRE RMVKQRRDHA LVSLVGYTNA
GKSTLMRALT GEEVYIADQL FATLDTKTRL WKIPGWGDAL LSDTVGFVRD LPHSLVASFK
STLEEARHAD LLLHVVDASN PEAEAQVATV EAVLEEIGVE LKNFILVLNK ADQVPDRMAL
DLLRARYEWS VSISARTGDG LDRLAQLVVD RLGDGLESVT VSTGIEDGKL LGWLSEHATI
IDTHYSETTA TFRCRISRSM LPRLRQRGTV LEDHHDQSSL EAVG
|
|---|
| |