Gene Plim_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1696 
Symbol 
ID9138397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp2201722 
End bp2202429 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content53% 
IMG OID 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003629725 
Protein GI296121947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTGA ACCAAATCAT CGAGTGGGCC GGGAACTCCA TCTACGCCTT TCAGGCATTG 
GGAGCATTAG TCGGTGGGAC ATTGTGTGTG ATTCTGTTTC GCCAACTGGC AACCAAACGT 
TTTCGTACAC ACAAAGAGGC GGAAGAGTTT CGCGAAGAAT GCTCTCAATG GATTCGCGAC 
CACAATTGGG AAGCCTTGAT TGCCCGTTGC GATGCATCAC CCTGGTGGAC GAAAGTTTCT 
CCTCAACTGC TGGGGTTAGC TGCCAGCCGA ACGGACATCC CTCCCGCCGA GATCCGAAAT 
TTTGCGCTCG ATCAGTTCGA GCGGGAAGTT CAGGCCGAAC TTGAGCACAA AGTCATGTGG 
GTCAACACGG TCATCAAATC AGCCCCGATG CTGGGTCTGT TAGGGACGGT TGCGGGGATG 
ATTGCAGCCT TCGGCAAAAT TGCTTCCATG CAGAAATCCG GGACCGATCC TTCCATGCTG 
GCTAACGATA TCAGCCTGGC ACTCATCACC ACCGCCGTGG GTCTCGTGAT AGCCGTTCCA 
CTGATGATTG CGATTTCTGC GATTCTGATT CGTGTTCGCA AATTGCAGTT TGAAGTTGAT 
CAGATTCTCA CTCCACTCCT CGATCAGCTG GCAGAGGCCC GGTTTGCTGA AACCCAGCAA 
AAAGTACGTA CATCATCCAG CGAACGGCAG GTGGAACGTA CCCGATGA
 
Protein sequence
MELNQIIEWA GNSIYAFQAL GALVGGTLCV ILFRQLATKR FRTHKEAEEF REECSQWIRD 
HNWEALIARC DASPWWTKVS PQLLGLAASR TDIPPAEIRN FALDQFEREV QAELEHKVMW 
VNTVIKSAPM LGLLGTVAGM IAAFGKIASM QKSGTDPSML ANDISLALIT TAVGLVIAVP 
LMIAISAILI RVRKLQFEVD QILTPLLDQL AEARFAETQQ KVRTSSSERQ VERTR