Gene Plim_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1683 
Symbol 
ID9138384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2182509 
End bp2183282 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content53% 
IMG OID 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_003629712 
Protein GI296121934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.875947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGACT ATCGCGTTCA ACTCGACACC TTCAGCGGTC CTCTGGACCT GCTGCTCTAT 
CTGGTGCGCC GCAACGAAAT CGATCTGCTC GATTTGCCTA TCTCGCAGAT TACTAATCAG
TTTCTCACAT TTCTGCAGGT CCTTGAGCTG ATCGATCTGG ATACCGTGGG AGAATTTGTC
GTCATGGCAA GTTCTCTGAT CGAGATCAAA AGCCGCCTCG TTCTCCCTCG GGCTGAGGAT
CAGGCCCAGG AAGCTCAATC AGCCATGGGG GAAGACCCCC GGGCAGAACT CGTGGAGCAG
TTACTCGAAT ACAAGCGATA TCGAGATGCA GGACAAGCCC TGCAGAAACA GGCCGACGAC
TGGCACAATC ATTTCCCGAG AATGACCAGT GAAAAGCCCA AATCGAGCCG GGATATCGCC
AACGACTCTT TCAAAGAAGT CGAACTCTGG GATCTGGTGA GTGCCCTGAC TCGAGTCATG
CAGAAGAAGA TCGTCGTCGA AACAGCTGCT ATTCGTTACG ACGACACTCC CATTTCTGTC
TATGTCGAAC GAATTGGAGC ACATGTCCGC AAGACCGGTC GGGCATCGTT CAGCGAATTC
TTCGAAGGTG CCAACGAGCG CAGCAAAATC GTGGGCATCT TTCTGGCTGT CCTTGAACTT
CTCAGGCATC ACCAGTTTCA TGCCGAGCAA CCAGAGCCTC ATGGCGAGAT CTATCTCATG
CCACCTGACA ATCCGGAGCA TGCCTCGTCA GTCGATCCTG CTGAAACTCC CTGA
 
Protein sequence
MPDYRVQLDT FSGPLDLLLY LVRRNEIDLL DLPISQITNQ FLTFLQVLEL IDLDTVGEFV 
VMASSLIEIK SRLVLPRAED QAQEAQSAMG EDPRAELVEQ LLEYKRYRDA GQALQKQADD
WHNHFPRMTS EKPKSSRDIA NDSFKEVELW DLVSALTRVM QKKIVVETAA IRYDDTPISV
YVERIGAHVR KTGRASFSEF FEGANERSKI VGIFLAVLEL LRHHQFHAEQ PEPHGEIYLM
PPDNPEHASS VDPAETP